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Lj1g3v2842370.1

Overview

Field Value
Gene ID Lj1g3v2842370
Transcript ID Lj1g3v2842370.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: phosphoglycolate phosphatase-like [Cicer arietinum] gi|502105712|ref|XP_004492869.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR19288:SF33
76 341 266 3.80E-169 –
PANTHER
PTHR19288
76 341 266 3.80E-169 –
Gene3D
G3DSA:3.40.50.1000
81 158 78 3.00E-47
IPR023214
TIGRFAM
TIGR01452
86 340 255 1.60E-109
IPR006349
SUPERFAMILY
SSF56784
86 342 257 3.15E-61
IPR023214
CDD
cd01427
89 332 244 1.25E-16 –
TIGRFAM
TIGR01460
89 335 247 7.40E-60
IPR006357
Pfam
PF13344
89 190 102 1.30E-33
IPR006357
Gene3D
G3DSA:3.40.50.10410
159 285 127 2.40E-41
IPR023215
Gene3D
G3DSA:3.40.50.1000
286 342 57 3.00E-47
IPR023214
Pfam
PF13242
286 340 55 9.50E-18 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016791
Molecular function Phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj1g3v2842370.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2842370.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.