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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2894980 |
| Transcript ID | Lj1g3v2894980.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2 [Theobroma cacao] gi|508701797|gb|EOX93693.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 217 | 217 | 1.60E-34 | ||
| PANTHER | 1 | 240 | 240 | 0 | – | |
| PANTHER | 1 | 240 | 240 | 0 | – | |
| SUPERFAMILY | 30 | 66 | 37 | 1.73E-06 | ||
| SUPERFAMILY | 188 | 264 | 77 | 1.73E-06 | ||
| Gene3D | 194 | 303 | 110 | 2.80E-06 | ||
| PANTHER | 265 | 438 | 174 | 0 | – | |
| PANTHER | 265 | 438 | 174 | 0 | – | |
| PANTHER | 544 | 682 | 139 | 0 | – | |
| PANTHER | 544 | 682 | 139 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Meiotic cell cycle | Progression through the phases of the meiotic cell cycle, in which canonically a cell replicates to produce four offspring with half the chromosomal content of the progenitor cell via two nuclear divisions. |
Expression pattern of Lj1g3v2894980.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2894980.1, powered by CORGI.
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