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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2938380 |
| Transcript ID | Lj1g3v2938380.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | peroxidase2 [Medicago sativa] gi|971564|emb|CAA62228.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 23 | 23 | – | – | |
| PANTHER | 1 | 322 | 322 | 1.50E-234 | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| PANTHER | 1 | 322 | 322 | 1.50E-234 | – | |
| Phobius | 7 | 18 | 12 | – | – | |
| Phobius | 19 | 23 | 5 | – | – | |
| ProSiteProfiles | 24 | 322 | 299 | 74.72 | ||
| Phobius | 24 | 322 | 299 | – | – | |
| SUPERFAMILY | 24 | 321 | 298 | 5.30E-106 | ||
| CDD | 24 | 321 | 298 | 2.81E-168 | ||
| Gene3D | 31 | 179 | 149 | 1.20E-35 | – | |
| PRINTS | 34 | 53 | 20 | 6.50E-57 | ||
| Pfam | 42 | 287 | 246 | 1.70E-71 | ||
| ProSitePatterns | 56 | 67 | 12 | – | ||
| PRINTS | 56 | 70 | 15 | 3.50E-31 | ||
| PRINTS | 58 | 78 | 21 | 6.50E-57 | ||
| PRINTS | 99 | 112 | 14 | 6.50E-57 | ||
| PRINTS | 120 | 130 | 11 | 6.50E-57 | ||
| PRINTS | 121 | 138 | 18 | 3.50E-31 | ||
| PRINTS | 139 | 151 | 13 | 3.50E-31 | ||
| PRINTS | 139 | 154 | 16 | 6.50E-57 | ||
| Gene3D | 180 | 302 | 123 | 5.00E-50 | – | |
| PRINTS | 186 | 198 | 13 | 6.50E-57 | ||
| PRINTS | 187 | 202 | 16 | 3.50E-31 | ||
| ProSitePatterns | 187 | 197 | 11 | – | ||
| PRINTS | 241 | 256 | 16 | 6.50E-57 | ||
| PRINTS | 243 | 258 | 16 | 3.50E-31 | ||
| PRINTS | 257 | 274 | 18 | 6.50E-57 | ||
| PRINTS | 297 | 310 | 14 | 6.50E-57 | ||
| Coils | 322 | 322 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Hydrogen peroxide catabolic process | The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2). | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj1g3v2938380.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2938380.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.