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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2940670 |
| Transcript ID | Lj1g3v2940670.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cationic amino acid transporter 9, chloroplastic-like isoform X2 [Cicer arietinum] gi|502090017|ref|XP_004489094.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 49 | 49 | – | – | |
| PANTHER | 19 | 445 | 427 | 0 | ||
| PANTHER | 19 | 445 | 427 | 0 | – | |
| TMHMM | 50 | 72 | 23 | – | – | |
| Phobius | 50 | 71 | 22 | – | – | |
| Pfam | 50 | 459 | 410 | 2.80E-51 | ||
| Phobius | 72 | 82 | 11 | – | – | |
| TMHMM | 79 | 101 | 23 | – | – | |
| Phobius | 83 | 104 | 22 | – | – | |
| Phobius | 105 | 115 | 11 | – | – | |
| TMHMM | 111 | 133 | 23 | – | – | |
| Phobius | 116 | 137 | 22 | – | – | |
| Phobius | 138 | 177 | 40 | – | – | |
| TMHMM | 145 | 164 | 20 | – | – | |
| Phobius | 178 | 200 | 23 | – | – | |
| TMHMM | 179 | 201 | 23 | – | – | |
| Phobius | 201 | 206 | 6 | – | – | |
| Phobius | 207 | 228 | 22 | – | – | |
| TMHMM | 208 | 230 | 23 | – | – | |
| Phobius | 229 | 247 | 19 | – | – | |
| TMHMM | 240 | 262 | 23 | – | – | |
| Phobius | 248 | 269 | 22 | – | – | |
| Phobius | 270 | 280 | 11 | – | – | |
| Phobius | 281 | 307 | 27 | – | – | |
| TMHMM | 283 | 305 | 23 | – | – | |
| Phobius | 308 | 326 | 19 | – | – | |
| Phobius | 327 | 350 | 24 | – | – | |
| TMHMM | 328 | 350 | 23 | – | – | |
| Phobius | 351 | 382 | 32 | – | – | |
| Phobius | 383 | 401 | 19 | – | – | |
| Phobius | 402 | 406 | 5 | – | – | |
| TMHMM | 403 | 425 | 23 | – | – | |
| Phobius | 407 | 425 | 19 | – | – | |
| Phobius | 426 | 440 | 15 | – | – | |
| TMHMM | 440 | 459 | 20 | – | – | |
| Phobius | 441 | 459 | 19 | – | – | |
| Phobius | 460 | 464 | 5 | – | – | |
| Phobius | 465 | 484 | 20 | – | – | |
| TMHMM | 466 | 484 | 19 | – | – | |
| PANTHER | 484 | 561 | 78 | 0 | – | |
| PANTHER | 484 | 561 | 78 | 0 | ||
| Phobius | 485 | 495 | 11 | – | – | |
| TMHMM | 494 | 516 | 23 | – | – | |
| Pfam | 495 | 544 | 50 | 2.90E-15 | ||
| Phobius | 496 | 516 | 21 | – | – | |
| Phobius | 517 | 521 | 5 | – | – | |
| Phobius | 522 | 540 | 19 | – | – | |
| TMHMM | 523 | 545 | 23 | – | – | |
| Phobius | 541 | 561 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v2940670.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2940670.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.