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Lj1g3v2995580.1

Overview

Field Value
Gene ID Lj1g3v2995580
Transcript ID Lj1g3v2995580.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN-like [Glycine max] gi|356526467|ref|XP_003531839.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS51181
1 139 139 23.323
IPR029023
PANTHER
PTHR12305
1 197 197 1.30E-109 –
SUPERFAMILY
SSF52799
2 136 135 1.90E-34
IPR029021
Gene3D
G3DSA:3.90.190.10
2 135 134 1.00E-35
IPR029021
Pfam
PF13350
59 110 52 2.40E-06
IPR026893
ProSitePatterns
PS00383
78 88 11 –
IPR016130
SMART
SM01326
152 324 173 1.60E-14
IPR014020
ProSiteProfiles
PS51182
170 325 156 13.625
IPR014020
Pfam
PF10409
214 322 109 2.00E-11
IPR014020
SUPERFAMILY
SSF49562
229 324 96 1.50E-16
IPR000008
Gene3D
G3DSA:2.60.40.1110
243 323 81 4.20E-12 –
PANTHER
PTHR12305
245 335 91 1.30E-109 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004725
Molecular function Protein tyrosine phosphatase activity Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
Subterm of
GO:0016311
Biological process Dephosphorylation The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
Subterm of

Genome browser

LORE1 insertions 21

Expression data

Expression pattern

Expression pattern of Lj1g3v2995580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2995580.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.