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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3183510 |
| Transcript ID | Lj1g3v3183510.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sulfate transporter 4.1, chloroplastic-like [Glycine max] gi|356568949|ref|XP_003552670.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 79 | 79 | – | – | |
| PANTHER | 5 | 562 | 558 | 1.20E-258 | – | |
| PANTHER | 5 | 562 | 558 | 1.20E-258 | ||
| TIGRFAM | 67 | 562 | 496 | 1.60E-167 | ||
| Phobius | 80 | 97 | 18 | – | – | |
| Pfam | 81 | 454 | 374 | 1.20E-123 | ||
| Phobius | 98 | 108 | 11 | – | – | |
| TMHMM | 105 | 127 | 23 | – | – | |
| Phobius | 109 | 127 | 19 | – | – | |
| Phobius | 128 | 133 | 6 | – | – | |
| Phobius | 134 | 153 | 20 | – | – | |
| TMHMM | 134 | 153 | 20 | – | – | |
| Phobius | 154 | 158 | 5 | – | – | |
| Phobius | 159 | 181 | 23 | – | – | |
| TMHMM | 163 | 185 | 23 | – | – | |
| Phobius | 182 | 192 | 11 | – | – | |
| TMHMM | 192 | 214 | 23 | – | – | |
| Phobius | 193 | 215 | 23 | – | – | |
| Phobius | 216 | 238 | 23 | – | – | |
| TMHMM | 239 | 256 | 18 | – | – | |
| Phobius | 239 | 257 | 19 | – | – | |
| Phobius | 258 | 268 | 11 | – | – | |
| Phobius | 269 | 289 | 21 | – | – | |
| TMHMM | 269 | 291 | 23 | – | – | |
| Phobius | 290 | 318 | 29 | – | – | |
| Phobius | 319 | 342 | 24 | – | – | |
| TMHMM | 320 | 342 | 23 | – | – | |
| Phobius | 343 | 353 | 11 | – | – | |
| Phobius | 354 | 371 | 18 | – | – | |
| TMHMM | 355 | 377 | 23 | – | – | |
| Phobius | 372 | 390 | 19 | – | – | |
| Phobius | 391 | 412 | 22 | – | – | |
| TMHMM | 392 | 414 | 23 | – | – | |
| Phobius | 413 | 418 | 6 | – | – | |
| Phobius | 419 | 442 | 24 | – | – | |
| TMHMM | 419 | 441 | 23 | – | – | |
| Phobius | 443 | 447 | 5 | – | – | |
| Phobius | 448 | 479 | 32 | – | – | |
| TMHMM | 456 | 478 | 23 | – | – | |
| Phobius | 480 | 571 | 92 | – | – | |
| Gene3D | 504 | 538 | 35 | 8.50E-04 | ||
| ProSiteProfiles | 504 | 563 | 60 | 11.182 | ||
| Pfam | 505 | 562 | 58 | 3.00E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Secondary active sulfate transmembrane transporter activity | Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
| Biological process | Sulfate transport | The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Sulfate transmembrane transporter activity | Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3183510.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3183510.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.