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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3256700 |
| Transcript ID | Lj1g3v3256700.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: MATE efflux family protein 7-like [Glycine max] gi|356499617|ref|XP_003518634.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 39 | 39 | – | – | |
| PANTHER | 2 | 473 | 472 | 5.60E-281 | – | |
| PANTHER | 2 | 473 | 472 | 5.60E-281 | – | |
| CDD | 30 | 463 | 434 | 1.28E-158 | – | |
| TMHMM | 36 | 58 | 23 | – | – | |
| TIGRFAM | 39 | 436 | 398 | 4.00E-78 | ||
| Pfam | 39 | 199 | 161 | 3.50E-30 | ||
| Phobius | 40 | 61 | 22 | – | – | |
| Phobius | 62 | 66 | 5 | – | – | |
| Phobius | 67 | 91 | 25 | – | – | |
| TMHMM | 78 | 100 | 23 | – | – | |
| Phobius | 92 | 111 | 20 | – | – | |
| TMHMM | 107 | 129 | 23 | – | – | |
| Phobius | 112 | 132 | 21 | – | – | |
| Phobius | 133 | 143 | 11 | – | – | |
| TMHMM | 144 | 166 | 23 | – | – | |
| Phobius | 144 | 166 | 23 | – | – | |
| Phobius | 167 | 177 | 11 | – | – | |
| Phobius | 178 | 204 | 27 | – | – | |
| TMHMM | 179 | 201 | 23 | – | – | |
| Phobius | 205 | 209 | 5 | – | – | |
| Phobius | 210 | 230 | 21 | – | – | |
| TMHMM | 211 | 233 | 23 | – | – | |
| Phobius | 231 | 250 | 20 | – | – | |
| Phobius | 251 | 271 | 21 | – | – | |
| TMHMM | 254 | 276 | 23 | – | – | |
| Pfam | 260 | 422 | 163 | 1.90E-30 | ||
| Phobius | 272 | 290 | 19 | – | – | |
| Phobius | 291 | 313 | 23 | – | – | |
| Phobius | 314 | 332 | 19 | – | – | |
| TMHMM | 332 | 354 | 23 | – | – | |
| Phobius | 333 | 352 | 20 | – | – | |
| Phobius | 353 | 371 | 19 | – | – | |
| Phobius | 372 | 392 | 21 | – | – | |
| TMHMM | 375 | 396 | 22 | – | – | |
| Phobius | 393 | 403 | 11 | – | – | |
| Phobius | 404 | 428 | 25 | – | – | |
| TMHMM | 406 | 428 | 23 | – | – | |
| Phobius | 429 | 433 | 5 | – | – | |
| Phobius | 434 | 456 | 23 | – | – | |
| TMHMM | 435 | 457 | 23 | – | – | |
| Phobius | 457 | 478 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3256700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3256700.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.