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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3317360 |
| Transcript ID | Lj1g3v3317360.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | RecName: Full=Ribulose bisphosphate carboxylase small chain 3A, chloroplastic; Short=RuBisCO small subunit 3A; Flags: Precursorgi|20855|emb|CAA27864.1| ribulose bisphosphate carboxylase [Pisum sativum] gi|132106|sp|P07689.1|RBS3_PEA |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | – | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| Pfam | 2 | 45 | 44 | 4.60E-21 | ||
| PANTHER | 2 | 158 | 157 | 5.70E-110 | – | |
| Phobius | 6 | 14 | 9 | – | – | |
| Phobius | 15 | 22 | 8 | – | – | |
| PRINTS | 21 | 38 | 18 | 8.00E-59 | ||
| Phobius | 23 | 184 | 162 | – | – | |
| PRINTS | 47 | 65 | 19 | 8.00E-59 | ||
| SUPERFAMILY | 59 | 158 | 100 | 4.58E-42 | ||
| Gene3D | 59 | 158 | 100 | 7.80E-47 | ||
| PRINTS | 68 | 94 | 27 | 8.00E-59 | ||
| SMART | 69 | 167 | 99 | 3.30E-15 | ||
| Pfam | 70 | 158 | 89 | 1.90E-28 | ||
| PRINTS | 96 | 111 | 16 | 8.00E-59 | ||
| PRINTS | 118 | 147 | 30 | 8.00E-59 | ||
| Phobius | 185 | 205 | 21 | – | – | |
| Phobius | 206 | 209 | 4 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v3317360.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3317360.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.