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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3329000 |
| Transcript ID | Lj1g3v3329000.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Cicer arietinum] gi|502090123|ref|XP_004489128.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 7 | 7 | – | – | |
| PANTHER | 3 | 231 | 229 | 5.80E-148 | – | |
| PANTHER | 3 | 231 | 229 | 5.80E-148 | ||
| TMHMM | 4 | 23 | 20 | – | – | |
| Phobius | 8 | 18 | 11 | – | – | |
| Phobius | 19 | 23 | 5 | – | – | |
| Phobius | 24 | 46 | 23 | – | – | |
| TMHMM | 44 | 69 | 26 | – | – | |
| Phobius | 47 | 70 | 24 | – | – | |
| Pfam | 64 | 185 | 122 | 7.40E-20 | ||
| Phobius | 71 | 76 | 6 | – | – | |
| Phobius | 77 | 101 | 25 | – | – | |
| TMHMM | 79 | 101 | 23 | – | – | |
| Phobius | 102 | 201 | 100 | – | – | |
| TMHMM | 159 | 181 | 23 | – | – | |
| TMHMM | 201 | 220 | 20 | – | – | |
| Phobius | 202 | 220 | 19 | – | – | |
| Phobius | 221 | 238 | 18 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj1g3v3329000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3329000.1, powered by CORGI.
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