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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3407680 |
| Transcript ID | Lj1g3v3407680.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Glucan endo-1,3-beta-glucosidase [Medicago truncatula] gi|357467255|ref|XP_003603912.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| TMHMM | 10 | 32 | 23 | – | – | |
| Phobius | 12 | 33 | 22 | – | – | |
| Phobius | 34 | 39 | 6 | – | – | |
| TMHMM | 39 | 61 | 23 | – | – | |
| Phobius | 40 | 60 | 21 | – | – | |
| PANTHER | 54 | 473 | 420 | 1.10E-288 | – | |
| PANTHER | 54 | 473 | 420 | 1.10E-288 | – | |
| Pfam | 60 | 377 | 318 | 7.40E-90 | ||
| Gene3D | 60 | 378 | 319 | 1.90E-122 | ||
| SUPERFAMILY | 60 | 377 | 318 | 5.27E-93 | ||
| Phobius | 61 | 491 | 431 | – | – | |
| ProSitePatterns | 292 | 305 | 14 | – | ||
| Pfam | 400 | 472 | 73 | 1.20E-22 | ||
| SMART | 400 | 485 | 86 | 1.10E-47 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of Lj1g3v3407680.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3407680.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.