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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PS00587
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 104 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 0.028s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0019959.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Glycine max] gi|356561929|ref|XP_003549229.1| chr0 7959644 7960267 -
2 domain predictions
2 GO terms
Lj0g3v0036859.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Glycine max] gi|356525258|ref|XP_003531243.1| chr0 11839473 11842994 +
2 domain predictions
2 GO terms
Lj0g3v0063489.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 5-like [Cicer arietinum] gi|502165509|ref|XP_004513603.1| chr0 21593419 21595660 +
2 domain predictions
2 GO terms
Lj0g3v0073059.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 8-like [Glycine max] gi|356560973|ref|XP_003548760.1| chr0 27303707 27305921 +
2 domain predictions
2 GO terms
Lj0g3v0099909.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 2-like [Glycine max] gi|356553276|ref|XP_003544983.1| chr0 42392741 42396021 +
2 domain predictions
2 GO terms
Lj0g3v0113089.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 5-like [Glycine max] gi|356520122|ref|XP_003528714.1| chr0 49369467 49372161 -
2 domain predictions
2 GO terms
Lj0g3v0113089.2
n.a. Glucan endo-1,3-beta-glucosidase [Medicago truncatula] gi|358347120|ref|XP_003637610.1| chr0 49369636 49370798 -
2 domain predictions
2 GO terms
Lj0g3v0114589.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase-like [Glycine max] gi|356543803|ref|XP_003540349.1| chr0 50250094 50250927 +
2 domain predictions
2 GO terms
Lj0g3v0198239.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Cicer arietinum] gi|502123809|ref|XP_004498268.1| chr0 96616969 96621898 +
2 domain predictions
2 GO terms
Lj0g3v0201589.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 5-like [Glycine max] gi|356520122|ref|XP_003528714.1| chr0 99685023 99686546 +
2 domain predictions
2 GO terms
Lj0g3v0202539.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase-like [Cicer arietinum] gi|502084830|ref|XP_004487771.1| chr0 100249079 100249795 -
2 domain predictions
2 GO terms
Lj0g3v0235809.1
n.a. Glucan endo-1,3-beta-glucosidase [Medicago truncatula] gi|357467255|ref|XP_003603912.1| chr0 122176035 122179539 +
2 domain predictions
2 GO terms
Lj0g3v0278449.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase-like [Glycine max] gi|356543803|ref|XP_003540349.1| chr0 144584261 144584869 +
2 domain predictions
2 GO terms
Lj0g3v0306599.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 5-like [Glycine max] gi|356515517|ref|XP_003526446.1| chr0 159978343 159982412 -
2 domain predictions
2 GO terms
Lj1g3v1220270.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 8-like [Cicer arietinum] gi|502136874|ref|XP_004502874.1| chr1 14881811 14882968 -
2 domain predictions
2 GO terms
Lj1g3v3407680.1
n.a. Glucan endo-1,3-beta-glucosidase [Medicago truncatula] gi|357467255|ref|XP_003603912.1| chr1 39389450 39392935 -
2 domain predictions
2 GO terms
Lj1g3v3580600.1
n.a. PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like [Cicer arietinum] gi|502103392|ref|XP_004492271.1| chr1 41114840 41120115 -
2 domain predictions
2 GO terms
Lj1g3v3962430.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 8-like [Glycine max] gi|356560973|ref|XP_003548760.1| chr1 46421452 46424837 +
2 domain predictions
2 GO terms
Lj1g3v4139390.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Cicer arietinum] gi|502097693|ref|XP_004491054.1| chr1 48991932 48993540 +
2 domain predictions
2 GO terms
Lj2g3v0891220.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 13-like [Glycine max] gi|356523785|ref|XP_003530515.1| chr2 13612773 13614750 +
2 domain predictions
2 GO terms
Lj2g3v2879510.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 12-like isoform X2 [Cicer arietinum] gi|502097882|ref|XP_004491104.1| chr2 37527533 37530401 -
2 domain predictions
2 GO terms
Lj2g3v3034050.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Glycine max] gi|356511321|ref|XP_003524375.1| chr2 39200950 39205340 -
2 domain predictions
2 GO terms
Lj2g3v3209740.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Glycine max] gi|356501562|ref|XP_003519593.1| chr2 41084641 41086715 -
2 domain predictions
2 GO terms
Lj3g3v0718350.1
n.a. Beta-1 3-glucanase [Medicago truncatula] gi|357513321|ref|XP_003626949.1| chr3 7819510 7822638 +
2 domain predictions
2 GO terms
Lj3g3v2484150.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase-like [Glycine max] gi|356543803|ref|XP_003540349.1| chr3 30673857 30676131 -
2 domain predictions
2 GO terms
Lj4g3v0095220.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 5-like [Glycine max] gi|356520122|ref|XP_003528714.1| chr4 806224 807815 +
2 domain predictions
2 GO terms
Lj4g3v0149330.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 1-like [Glycine max] gi|356522003|ref|XP_003529639.1| chr4 1551961 1556017 -
2 domain predictions
2 GO terms
Lj4g3v0149330.2
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 1-like [Glycine max] gi|356522003|ref|XP_003529639.1| chr4 1551961 1556017 -
2 domain predictions
2 GO terms
Lj4g3v0486180.1
n.a. PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like [Cicer arietinum] gi|502142798|ref|XP_004505110.1| chr4 8214316 8215359 +
2 domain predictions
2 GO terms
Lj4g3v0667980.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase-like isoform X1 [Cicer arietinum] gi|502143394|ref|XP_004505325.1| chr4 10823547 10827358 -
2 domain predictions
2 GO terms
Lj4g3v2215530.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 5-like [Glycine max] gi|356545800|ref|XP_003541322.1| chr4 30754278 30756129 -
2 domain predictions
2 GO terms
Lj4g3v2604040.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Glycine max] gi|356525258|ref|XP_003531243.1| chr4 35036293 35042672 -
2 domain predictions
2 GO terms
Lj4g3v3042780.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 13-like [Glycine max] gi|356511391|ref|XP_003524410.1| chr4 40646275 40648000 -
2 domain predictions
2 GO terms
Lj4g3v3112890.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Glycine max] gi|356511321|ref|XP_003524375.1| chr4 41434974 41439261 -
2 domain predictions
2 GO terms
Lj4g3v3112890.2
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Glycine max] gi|356511321|ref|XP_003524375.1| chr4 41435433 41439261 -
2 domain predictions
2 GO terms
Lj5g3v0553280.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 5-like [Glycine max] gi|356561923|ref|XP_003549226.1| chr5 6626932 6631854 -
2 domain predictions
2 GO terms
Lj6g3v0423710.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 2-like [Glycine max] gi|356539822|ref|XP_003538392.1| chr6 3950719 3954153 +
2 domain predictions
2 GO terms
Lj6g3v1706130.1
n.a. PREDICTED: LOW QUALITY PROTEIN: glucan endo-1,3-beta-glucosidase 5-like [Glycine max] gi|356555785|ref|XP_003546210.1| chr6 19261238 19263063 +
2 domain predictions
2 GO terms
Lj6g3v1706140.1
n.a. n.a. chr6 19261238 19264548 -
2 domain predictions
2 GO terms
Lj6g3v1859510.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 1-like [Glycine max] gi|356563059|ref|XP_003549783.1| chr6 20386503 20389741 -
2 domain predictions
2 GO terms
LotjaGi1g1v0025100.1
n.a. Glucan endo-1,3-beta-glucosidase, putative; TAIR: AT5G55180.1 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|Q9FJU9|E1313_ARATH Glucan endo-1,3-beta-glucosidase 13; TrEMBL-Plants: tr|A0A0R0L9X1|A0A0R0L9X1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0025100 LjG1.1_chr1 2981875 2984376 -
2 domain predictions
2 GO terms
LotjaGi1g1v0066700.1
n.a. Glucan endo-1,3-beta-glucosidase 3; TAIR: AT2G05790.1 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|Q9ZU91|E133_ARATH Glucan endo-1,3-beta-glucosidase 3; TrEMBL-Plants: tr|I1JIJ8|I1JIJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0066700 LjG1.1_chr1 9182045 9185244 +
2 domain predictions
2 GO terms
LotjaGi1g1v0066700.2
n.a. Glucan endo-1,3-beta-glucosidase, putative; TAIR: AT2G05790.1 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|Q9FJU9|E1313_ARATH Glucan endo-1,3-beta-glucosidase 13; TrEMBL-Plants: tr|A0A0R0GI68|A0A0R0GI68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0066700 LjG1.1_chr1 9182543 9184177 +
2 domain predictions
2 GO terms
LotjaGi1g1v0066700.3
n.a. Glucan endo-1,3-beta-glucosidase, putative; TAIR: AT2G05790.1 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|Q9FJU9|E1313_ARATH Glucan endo-1,3-beta-glucosidase 13; TrEMBL-Plants: tr|A0A0R0GI68|A0A0R0GI68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0066700 LjG1.1_chr1 9182550 9184188 +
2 domain predictions
2 GO terms
LotjaGi1g1v0066700.4
n.a. Glucan endo-1,3-beta-glucosidase, putative; TAIR: AT2G05790.1 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|Q9FJU9|E1313_ARATH Glucan endo-1,3-beta-glucosidase 13; TrEMBL-Plants: tr|A0A0R0GI68|A0A0R0GI68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0066700 LjG1.1_chr1 9182573 9184177 +
2 domain predictions
2 GO terms
LotjaGi1g1v0081800.1
n.a. Glucan endo-1,3-beta-glucosidase, putative; TAIR: AT3G55780.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9FJU9|E1313_ARATH Glucan endo-1,3-beta-glucosidase 13; TrEMBL-Plants: tr|G7KBV7|G7KBV7_MEDTR Glycoside hydrolase family 17 protein; Found in the gene: LotjaGi1g1v0081800 LjG1.1_chr1 11798798 11800461 -
2 domain predictions
2 GO terms
LotjaGi1g1v0094500.1
n.a. Glucan endo-1,3-beta-glucosidase-like protein; TAIR: AT1G66250.1 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|Q9C7U5|E132_ARATH Glucan endo-1,3-beta-glucosidase 2; TrEMBL-Plants: tr|G7K1P2|G7K1P2_MEDTR Glucan endo-1,3-beta-glucosidase-like protein; Found in the gene: LotjaGi1g1v0094500 LjG1.1_chr1 14250414 14253872 -
2 domain predictions
2 GO terms
LotjaGi1g1v0094500.2
n.a. Glucan endo-1,3-beta-glucosidase-like protein; TAIR: AT1G66250.1 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|Q9C7U5|E132_ARATH Glucan endo-1,3-beta-glucosidase 2; TrEMBL-Plants: tr|K7M8E9|K7M8E9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0094500 LjG1.1_chr1 14250721 14252672 -
2 domain predictions
2 GO terms
LotjaGi1g1v0094500.3
n.a. Glucan endo-1,3-beta-glucosidase-like protein; TAIR: AT1G66250.1 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|Q9C7U5|E132_ARATH Glucan endo-1,3-beta-glucosidase 2; TrEMBL-Plants: tr|G7K1P2|G7K1P2_MEDTR Glucan endo-1,3-beta-glucosidase-like protein; Found in the gene: LotjaGi1g1v0094500 LjG1.1_chr1 14251118 14252682 -
2 domain predictions
2 GO terms
LotjaGi1g1v0094500.4
n.a. Glucan endo-1,3-beta-glucosidase-like protein; TAIR: AT1G66250.1 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|Q9C7U5|E132_ARATH Glucan endo-1,3-beta-glucosidase 2; TrEMBL-Plants: tr|G7K1P2|G7K1P2_MEDTR Glucan endo-1,3-beta-glucosidase-like protein; Found in the gene: LotjaGi1g1v0094500 LjG1.1_chr1 14251118 14252847 -
2 domain predictions
2 GO terms