Domain Predictions — View

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TIGR01027

Source: TIGRFAM

Description

proB: glutamate 5-kinase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0005737 View details of GO:0005737 AmiGO InterPro QuickGO	Cellular component	Cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.	Subterm of GO:0044424
GO:0006561 View details of GO:0006561 AmiGO InterPro QuickGO	Biological process	Proline biosynthetic process	The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.	Subterm of GO:0006560 GO:0009084 GO:0018130 GO:1901362

Associated Lotus transcripts 20

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0092639.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like [Glycine max] gi\|356504258\|ref\|XP_003520914.1\|	Domains Coil G3DSA:3.40.1160.10 G3DSA:3.40.605.10 IPR001048 IPR001057 IPR005715 IPR005766 IPR016161 IPR016162 IPR019797 MF_00456 PF00696 PR00474 PS00902 PTHR11063 PTHR11063:SF13 SSF53633 SSF53720 TIGR01027 TIGR01092 cd04256	21
Lj0g3v0092639.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like [Glycine max] gi\|356504258\|ref\|XP_003520914.1\|	Domains Coil G3DSA:3.40.1160.10 G3DSA:3.40.605.10 IPR001048 IPR001057 IPR005715 IPR005766 IPR016161 IPR016162 IPR019797 MF_00456 PF00696 PR00474 PS00902 PTHR11063 PTHR11063:SF13 SSF53633 SSF53720 TIGR01027 TIGR01092 cd04256	21
Lj0g3v0306219.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Delta-pyrroline-5-carboxylate synthetase [Glycine max] gi\|351726518\|ref\|NP_001238153.1\|	Domains G3DSA:3.40.1160.10 G3DSA:3.40.605.10 IPR001048 IPR001057 IPR005715 IPR011529 IPR016161 IPR016162 IPR019797 MF_00456 NON_CYTOPLASMIC_DOMAIN PF00696 PIRSF000729 PR00474 PS00902 PTHR11063 PTHR11063:SF13 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53633 SSF53720 SignalP-noTM_EUK TIGR01027	25
Lj1g3v3443810.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like [Glycine max] gi\|356504258\|ref\|XP_003520914.1\|	Domains Coil G3DSA:3.40.1160.10 G3DSA:3.40.309.10 G3DSA:3.40.605.10 IPR000965 IPR001048 IPR001057 IPR005715 IPR005766 IPR015590 IPR016161 IPR016162 IPR016163 MF_00412 MF_00456 PF00171 PF00696 PIRSF036429 PR00474 PTHR11063 PTHR11063:SF13 SSF53633 SSF53720 TIGR00407 TIGR01027 TIGR01092 cd07079	27
LotjaGi1g1v0086500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glutamate 5-kinase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp\|O04226\|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|I1JI26\|I1JI26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0086500	Domains G3DSA:3.40.1160.10 G3DSA:3.40.605.10 IPR001048 IPR001057 IPR005715 IPR016161 IPR016162 IPR019797 IPR036393 MF_00456 NON_CYTOPLASMIC_DOMAIN PF00696 PR00474 PS00902 PTHR11063 PTHR11063:SF18 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53633 SSF53720 SignalP-noTM TIGR01027	24
LotjaGi1g1v0086500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glutamate 5-kinase; TAIR: AT3G55610.2 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp\|P32296\|P5CS_VIGAC Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|I1JI26\|I1JI26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0086500	Domains G3DSA:3.40.1160.10 G3DSA:3.40.605.10 IPR001048 IPR001057 IPR005715 IPR016161 IPR016162 IPR019797 IPR036393 MF_00456 NON_CYTOPLASMIC_DOMAIN PF00696 PR00474 PS00902 PTHR11063 PTHR11063:SF18 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53633 SSF53720 SignalP-noTM TIGR01027	24
LotjaGi1g1v0086500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glutamate 5-kinase; TAIR: AT3G55610.2 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp\|P32296\|P5CS_VIGAC Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|I1JI26\|I1JI26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0086500	Domains G3DSA:3.40.1160.10 G3DSA:3.40.605.10 IPR001048 IPR001057 IPR005715 IPR016161 IPR016162 IPR019797 IPR036393 MF_00456 NON_CYTOPLASMIC_DOMAIN PF00696 PR00474 PS00902 PTHR11063 PTHR11063:SF18 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53633 SSF53720 SignalP-noTM TIGR01027	24
LotjaGi1g1v0086500.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glutamate 5-kinase; TAIR: AT3G55610.2 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp\|P32296\|P5CS_VIGAC Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|I1JI26\|I1JI26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0086500	Domains G3DSA:3.40.1160.10 G3DSA:3.40.605.10 IPR001048 IPR001057 IPR005715 IPR016161 IPR016162 IPR019797 IPR036393 MF_00456 NON_CYTOPLASMIC_DOMAIN PF00696 PR00474 PS00902 PTHR11063 PTHR11063:SF18 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53633 SSF53720 SignalP-noTM TIGR01027	24
LotjaGi1g1v0578400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp\|O04226\|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|V7B6I7\|V7B6I7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0578400	Domains Coil G3DSA:3.40.1160.10 G3DSA:3.40.309.10 G3DSA:3.40.605.10 IPR000965 IPR001048 IPR001057 IPR005715 IPR005766 IPR015590 IPR016161 IPR016162 IPR016163 IPR020593 IPR036393 MF_00412 MF_00456 PF00171 PF00696 PIRSF036429 PR00474 PS01223 PTHR11063 PTHR11063:SF16 SSF53633 SSF53720 TIGR00407 TIGR01027 TIGR01092 cd07079	30
LotjaGi1g1v0578400.11 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp\|O04226\|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|K7L1J4\|K7L1J4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0578400	Domains Coil G3DSA:3.40.1160.10 G3DSA:3.40.309.10 G3DSA:3.40.605.10 IPR000965 IPR001048 IPR001057 IPR005715 IPR005766 IPR015590 IPR016161 IPR016162 IPR016163 IPR020593 IPR036393 MF_00412 PF00171 PF00696 PIRSF036429 PR00474 PS01223 PTHR11063 PTHR11063:SF16 SSF53633 SSF53720 SignalP-noTM TIGR00407 TIGR01027 TIGR01092 cd07079	30
LotjaGi3g1v0230400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gamma-glutamyl phosphate reductase; TAIR: AT2G39800.1 delta1-pyrroline-5-carboxylate synthase 1; Swiss-Prot: sp\|O04015\|P5CS_ACTDE Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|I1JLN5\|I1JLN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0230400	Domains Coil G3DSA:3.40.1160.10 G3DSA:3.40.309.10 G3DSA:3.40.605.10 IPR000965 IPR001048 IPR001057 IPR005715 IPR005766 IPR015590 IPR016161 IPR016162 IPR016163 IPR019797 IPR020593 IPR036393 IPR041744 MF_00412 MF_00456 PF00171 PF00696 PIRSF036429 PR00474 PS00902 PS01223 PTHR11063 PTHR11063:SF16 SSF53633 SSF53720 TIGR00407 TIGR01027 TIGR01092 cd04256 cd07079	34
LotjaGi3g1v0230400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gamma-glutamyl phosphate reductase; TAIR: AT2G39800.1 delta1-pyrroline-5-carboxylate synthase 1; Swiss-Prot: sp\|O04226\|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|I1JLN5\|I1JLN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0230400	Domains Coil G3DSA:3.40.1160.10 G3DSA:3.40.309.10 G3DSA:3.40.605.10 IPR000965 IPR001048 IPR001057 IPR005715 IPR005766 IPR015590 IPR016161 IPR016162 IPR016163 IPR019797 IPR020593 IPR036393 IPR041744 MF_00412 MF_00456 PF00171 PF00696 PIRSF036429 PR00474 PS00902 PS01223 PTHR11063 PTHR11063:SF16 SSF53633 SSF53720 TIGR00407 TIGR01027 TIGR01092 cd04256 cd07079	34
LotjaGi3g1v0230400.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gamma-glutamyl phosphate reductase; TAIR: AT2G39800.1 delta1-pyrroline-5-carboxylate synthase 1; Swiss-Prot: sp\|O04226\|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|I1JLN5\|I1JLN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0230400	Domains Coil G3DSA:3.40.1160.10 G3DSA:3.40.309.10 G3DSA:3.40.605.10 IPR000965 IPR001048 IPR001057 IPR005715 IPR005766 IPR015590 IPR016161 IPR016162 IPR016163 IPR019797 IPR020593 IPR036393 IPR041744 MF_00412 MF_00456 PF00171 PF00696 PIRSF036429 PR00474 PS00902 PS01223 PTHR11063 PTHR11063:SF16 SSF53633 SSF53720 TIGR00407 TIGR01027 TIGR01092 cd04256 cd07079	34
LotjaGi3g1v0230400.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp\|O04226\|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|I1JLN5\|I1JLN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0230400	Domains Coil G3DSA:3.40.1160.10 G3DSA:3.40.309.10 G3DSA:3.40.605.10 IPR000965 IPR001048 IPR001057 IPR005715 IPR005766 IPR015590 IPR016161 IPR016162 IPR016163 IPR019797 IPR020593 IPR036393 IPR041744 MF_00412 MF_00456 PF00171 PF00696 PIRSF036429 PR00474 PS00902 PS01223 PTHR11063 PTHR11063:SF16 SSF53633 SSF53720 TIGR00407 TIGR01027 TIGR01092 cd04256 cd07079	34
LotjaGi6g1v0066400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glutamate 5-kinase; TAIR: AT3G55610.2 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp\|O04226\|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|Q6RUF7\|Q6RUF7_SOYBN Delta-pyrroline-5-carboxylate synthetase; Found in the gene: LotjaGi6g1v0066400	Domains G3DSA:3.40.1160.10 G3DSA:3.40.605.10 IPR001048 IPR001057 IPR005715 IPR016161 IPR016162 IPR019797 IPR036393 MF_00456 PF00696 PR00474 PS00902 PTHR11063 PTHR11063:SF18 SSF53633 SSF53720 TIGR01027	18
LotjaGi6g1v0066400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp\|O04015\|P5CS_ACTDE Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|Q6RUF7\|Q6RUF7_SOYBN Delta-pyrroline-5-carboxylate synthetase; Found in the gene: LotjaGi6g1v0066400	Domains G3DSA:3.40.1160.10 G3DSA:3.40.309.10 G3DSA:3.40.605.10 IPR000965 IPR001048 IPR001057 IPR005715 IPR005766 IPR015590 IPR016161 IPR016162 IPR016163 IPR019797 IPR020593 IPR036393 MF_00412 MF_00456 PF00171 PF00696 PIRSF036429 PR00474 PS00902 PS01223 PTHR11063 PTHR11063:SF18 SSF53633 SSF53720 TIGR00407 TIGR01027 TIGR01092 cd07079	31
LotjaGi6g1v0066400.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glutamate 5-kinase; TAIR: AT2G39800.1 delta1-pyrroline-5-carboxylate synthase 1; Swiss-Prot: sp\|O04226\|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|A0A0B2PJ53\|A0A0B2PJ53_GLYSO Delta-1-pyrroline-5-carboxylate synthase; Found in the gene: LotjaGi6g1v0066400	Domains G3DSA:3.40.1160.10 G3DSA:3.40.605.10 IPR001048 IPR001057 IPR005715 IPR016161 IPR016162 IPR019797 IPR036393 MF_00456 PF00696 PR00474 PS00902 PTHR11063 PTHR11063:SF18 SSF53633 SSF53720 TIGR01027	18
LotjaGi6g1v0066400.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp\|O04015\|P5CS_ACTDE Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|Q6RUF7\|Q6RUF7_SOYBN Delta-pyrroline-5-carboxylate synthetase; Found in the gene: LotjaGi6g1v0066400	Domains G3DSA:3.40.1160.10 G3DSA:3.40.309.10 G3DSA:3.40.605.10 IPR000965 IPR001048 IPR001057 IPR005715 IPR005766 IPR015590 IPR016161 IPR016162 IPR016163 IPR019797 IPR020593 IPR036393 MF_00412 MF_00456 PF00171 PF00696 PIRSF036429 PR00474 PS00902 PS01223 PTHR11063 PTHR11063:SF18 SSF53633 SSF53720 TIGR00407 TIGR01027 TIGR01092 cd07079	31
LotjaGi6g1v0066400.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glutamate 5-kinase; TAIR: AT2G39800.1 delta1-pyrroline-5-carboxylate synthase 1; Swiss-Prot: sp\|O04226\|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|A0A0B2PJ53\|A0A0B2PJ53_GLYSO Delta-1-pyrroline-5-carboxylate synthase; Found in the gene: LotjaGi6g1v0066400	Domains G3DSA:3.40.1160.10 G3DSA:3.40.605.10 IPR001048 IPR001057 IPR005715 IPR016161 IPR016162 IPR019797 IPR036393 MF_00456 PF00696 PR00474 PS00902 PTHR11063 PTHR11063:SF18 SSF53633 SSF53720 TIGR01027	18
LotjaGi6g1v0066400.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Delta-1-pyrroline-5-carboxylate synthetase; TAIR: AT3G55610.2 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp\|P32296\|P5CS_VIGAC Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr\|A0A0B2PJ53\|A0A0B2PJ53_GLYSO Delta-1-pyrroline-5-carboxylate synthase; Found in the gene: LotjaGi6g1v0066400	Domains G3DSA:3.40.1160.10 G3DSA:3.40.309.10 G3DSA:3.40.605.10 IPR001048 IPR001057 IPR005715 IPR005766 IPR015590 IPR016161 IPR016162 IPR016163 IPR019797 IPR036393 MF_00456 PF00171 PF00696 PIRSF036429 PR00474 PS00902 PTHR11063 PTHR11063:SF18 SSF53633 SSF53720 TIGR01027 TIGR01092	25

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TIGR01092	TIGRFAM	1	5.00