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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3458730 |
| Transcript ID | Lj1g3v3458730.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Respiratory burst oxidase-like protein [Medicago truncatula] gi|357505521|ref|XP_003623049.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 167 | 167 | – | – | |
| PANTHER | 3 | 565 | 563 | 0 | – | |
| PANTHER | 3 | 565 | 563 | 0 | – | |
| Pfam | 3 | 47 | 45 | 1.90E-09 | ||
| SFLD | 3 | 727 | 725 | 0 | – | |
| Gene3D | 14 | 58 | 45 | 3.00E-04 | ||
| SUPERFAMILY | 25 | 118 | 94 | 4.78E-15 | ||
| CDD | 26 | 73 | 48 | 1.66E-06 | ||
| ProSiteProfiles | 44 | 79 | 36 | 11.808 | ||
| SMART | 48 | 76 | 29 | 0.052 | ||
| ProSitePatterns | 57 | 69 | 13 | – | ||
| Gene3D | 59 | 131 | 73 | 1.40E-07 | ||
| ProSiteProfiles | 88 | 123 | 36 | 6.619 | ||
| SMART | 92 | 120 | 29 | 34 | ||
| SFLD | 158 | 727 | 570 | 0 | – | |
| Phobius | 168 | 186 | 19 | – | – | |
| TMHMM | 168 | 186 | 19 | – | – | |
| Phobius | 187 | 304 | 118 | – | – | |
| Pfam | 207 | 363 | 157 | 1.90E-20 | ||
| PRINTS | 252 | 270 | 19 | 5.80E-17 | ||
| TMHMM | 301 | 323 | 23 | – | – | |
| Phobius | 305 | 328 | 24 | – | – | |
| Phobius | 329 | 347 | 19 | – | – | |
| PRINTS | 345 | 365 | 21 | 5.80E-17 | ||
| Phobius | 348 | 369 | 22 | – | – | |
| TMHMM | 349 | 371 | 23 | – | – | |
| Phobius | 370 | 380 | 11 | – | – | |
| Phobius | 381 | 400 | 20 | – | – | |
| Phobius | 401 | 405 | 5 | – | – | |
| ProSiteProfiles | 402 | 533 | 132 | 13.429 | ||
| SUPERFAMILY | 405 | 486 | 82 | 9.61E-16 | ||
| Phobius | 406 | 424 | 19 | – | – | |
| Gene3D | 406 | 480 | 75 | 1.80E-11 | – | |
| Pfam | 406 | 530 | 125 | 1.20E-28 | ||
| CDD | 409 | 640 | 232 | 8.39E-39 | – | |
| Phobius | 425 | 538 | 114 | – | – | |
| PRINTS | 519 | 532 | 14 | 5.80E-17 | ||
| SUPERFAMILY | 520 | 528 | 9 | 9.61E-16 | ||
| SUPERFAMILY | 535 | 562 | 28 | 1.96E-11 | – | |
| Gene3D | 536 | 635 | 100 | 4.90E-13 | – | |
| Pfam | 537 | 710 | 174 | 3.60E-48 | ||
| Phobius | 539 | 556 | 18 | – | – | |
| TMHMM | 539 | 556 | 18 | – | – | |
| PRINTS | 542 | 559 | 18 | 5.80E-17 | ||
| Phobius | 557 | 727 | 171 | – | – | |
| PANTHER | 584 | 727 | 144 | 0 | – | |
| PANTHER | 584 | 727 | 144 | 0 | – | |
| SUPERFAMILY | 589 | 725 | 137 | 1.96E-11 | – | |
| Gene3D | 671 | 725 | 55 | 4.90E-13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj1g3v3458730.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3458730.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.