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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3458730 |
| Transcript ID | Lj1g3v3458730.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Respiratory burst oxidase-like protein [Medicago truncatula] gi|357505521|ref|XP_003623049.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 189 | 189 | – | – | |
| Pfam | 2 | 69 | 68 | 2.50E-18 | ||
| PANTHER | 2 | 572 | 571 | 0 | – | |
| PANTHER | 2 | 572 | 571 | 0 | – | |
| SFLD | 7 | 575 | 569 | 0 | – | |
| SUPERFAMILY | 9 | 135 | 127 | 2.72E-16 | ||
| Gene3D | 10 | 134 | 125 | 9.40E-13 | ||
| CDD | 48 | 95 | 48 | 1.99E-06 | ||
| ProSiteProfiles | 66 | 101 | 36 | 11.808 | ||
| ProSitePatterns | 79 | 91 | 13 | – | ||
| ProSiteProfiles | 110 | 145 | 36 | 5.643 | ||
| SFLD | 181 | 574 | 394 | 6.00E-42 | – | |
| TMHMM | 190 | 209 | 20 | – | – | |
| Phobius | 190 | 207 | 18 | – | – | |
| Phobius | 208 | 218 | 11 | – | – | |
| Phobius | 219 | 248 | 30 | – | – | |
| Pfam | 229 | 385 | 157 | 6.60E-19 | ||
| Phobius | 249 | 268 | 20 | – | – | |
| Phobius | 269 | 288 | 20 | – | – | |
| PRINTS | 274 | 292 | 19 | 4.50E-09 | ||
| Phobius | 289 | 326 | 38 | – | – | |
| TMHMM | 323 | 345 | 23 | – | – | |
| Phobius | 327 | 348 | 22 | – | – | |
| Phobius | 349 | 368 | 20 | – | – | |
| Phobius | 369 | 390 | 22 | – | – | |
| TMHMM | 371 | 393 | 23 | – | – | |
| Phobius | 391 | 401 | 11 | – | – | |
| TMHMM | 402 | 419 | 18 | – | – | |
| Phobius | 402 | 419 | 18 | – | – | |
| Phobius | 420 | 430 | 11 | – | – | |
| ProSiteProfiles | 424 | 541 | 118 | 13.244 | ||
| SUPERFAMILY | 427 | 537 | 111 | 3.19E-15 | ||
| Gene3D | 429 | 505 | 77 | 1.40E-10 | – | |
| Pfam | 429 | 538 | 110 | 9.90E-28 | ||
| TMHMM | 429 | 446 | 18 | – | – | |
| Phobius | 431 | 447 | 17 | – | – | |
| CDD | 439 | 576 | 138 | 2.80E-31 | – | |
| Phobius | 448 | 546 | 99 | – | – | |
| PRINTS | 527 | 540 | 14 | 4.50E-09 | ||
| Gene3D | 528 | 583 | 56 | 1.20E-05 | – | |
| SUPERFAMILY | 528 | 573 | 46 | 6.94E-07 | – | |
| Pfam | 545 | 572 | 28 | 1.90E-06 | ||
| Phobius | 547 | 568 | 22 | – | – | |
| TMHMM | 547 | 564 | 18 | – | – | |
| PRINTS | 550 | 567 | 18 | 4.50E-09 | ||
| Phobius | 569 | 601 | 33 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj1g3v3458730.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3458730.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.