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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3458730 |
| Transcript ID | Lj1g3v3458730.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Respiratory burst oxidase-like protein [Medicago truncatula] gi|357505521|ref|XP_003623049.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 167 | 167 | – | – | |
| SFLD | 3 | 553 | 551 | 0 | – | |
| PANTHER | 3 | 550 | 548 | 0 | – | |
| PANTHER | 3 | 550 | 548 | 0 | – | |
| Pfam | 3 | 47 | 45 | 1.50E-09 | ||
| Gene3D | 12 | 109 | 98 | 1.60E-10 | ||
| SUPERFAMILY | 25 | 113 | 89 | 2.54E-14 | ||
| CDD | 26 | 73 | 48 | 1.59E-06 | ||
| ProSiteProfiles | 44 | 79 | 36 | 11.808 | ||
| ProSitePatterns | 57 | 69 | 13 | – | ||
| ProSiteProfiles | 88 | 123 | 36 | 5.643 | ||
| SFLD | 159 | 552 | 394 | 4.50E-42 | – | |
| TMHMM | 168 | 187 | 20 | – | – | |
| Phobius | 168 | 185 | 18 | – | – | |
| Phobius | 186 | 196 | 11 | – | – | |
| Phobius | 197 | 226 | 30 | – | – | |
| Pfam | 207 | 363 | 157 | 6.20E-19 | ||
| Phobius | 227 | 246 | 20 | – | – | |
| Phobius | 247 | 266 | 20 | – | – | |
| PRINTS | 252 | 270 | 19 | 4.10E-09 | ||
| Phobius | 267 | 304 | 38 | – | – | |
| TMHMM | 301 | 323 | 23 | – | – | |
| Phobius | 305 | 326 | 22 | – | – | |
| Phobius | 327 | 346 | 20 | – | – | |
| Phobius | 347 | 368 | 22 | – | – | |
| TMHMM | 349 | 371 | 23 | – | – | |
| Phobius | 369 | 379 | 11 | – | – | |
| Phobius | 380 | 397 | 18 | – | – | |
| TMHMM | 380 | 397 | 18 | – | – | |
| Phobius | 398 | 408 | 11 | – | – | |
| ProSiteProfiles | 402 | 519 | 118 | 13.244 | ||
| SUPERFAMILY | 405 | 515 | 111 | 2.98E-15 | ||
| TMHMM | 407 | 424 | 18 | – | – | |
| Pfam | 407 | 516 | 110 | 9.40E-28 | ||
| Gene3D | 407 | 483 | 77 | 1.30E-10 | – | |
| Phobius | 409 | 425 | 17 | – | – | |
| CDD | 417 | 554 | 138 | 3.22E-31 | – | |
| Phobius | 426 | 524 | 99 | – | – | |
| PRINTS | 505 | 518 | 14 | 4.10E-09 | ||
| Gene3D | 506 | 561 | 56 | 1.10E-05 | – | |
| SUPERFAMILY | 506 | 551 | 46 | 6.68E-07 | – | |
| Pfam | 523 | 550 | 28 | 1.80E-06 | ||
| TMHMM | 525 | 542 | 18 | – | – | |
| Phobius | 525 | 546 | 22 | – | – | |
| PRINTS | 528 | 545 | 18 | 4.10E-09 | ||
| Phobius | 547 | 579 | 33 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj1g3v3458730.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3458730.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.