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Lj1g3v3646510.1

Overview

Field Value
Gene ID Lj1g3v3646510
Transcript ID Lj1g3v3646510.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description dhs1 [Glycine max] gi|351726826|ref|NP_001235604.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11703:SF0
1 363 363 5.30E-205 –
PANTHER
PTHR11703
1 363 363 5.30E-205
IPR002773
SUPERFAMILY
SSF52467
19 338 320 1.80E-121
IPR029035
Gene3D
G3DSA:3.40.910.10
37 155 119 1.20E-39
IPR002773
Pfam
PF01916
51 154 104 3.40E-27
IPR002773
Pfam
PF01916
155 335 181 4.60E-77
IPR002773
Gene3D
G3DSA:3.40.910.10
156 342 187 8.30E-93
IPR002773
MobiDBLite
mobidb-lite
341 418 78 – –
SUPERFAMILY
SSF52467
426 584 159 7.19E-47
IPR029035
Gene3D
G3DSA:3.40.910.10
444 584 141 3.00E-49
IPR002773
Pfam
PF01916
458 584 127 6.90E-36
IPR002773

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008612
Biological process Peptidyl-lysine modification to peptidyl-hypusine The modification of peptidyl-lysine to form hypusine, peptidyl-N6-(4-amino-2-hydroxybutyl)-L-lysine.
Subterm of

Genome browser

LORE1 insertions 21

Expression data

Expression pattern

Expression pattern of Lj1g3v3646510.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3646510.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.