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Lj1g3v3834180.1

Overview

Field Value
Gene ID Lj1g3v3834180
Transcript ID Lj1g3v3834180.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable adenylate kinase 1, chloroplastic-like [Cicer arietinum] gi|502166858|ref|XP_004513998.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23359:SF86
18 266 249 5.90E-141 –
PANTHER
PTHR23359
18 266 249 5.90E-141
IPR000850
Gene3D
G3DSA:3.40.50.300
58 258 201 2.10E-34
IPR027417
SUPERFAMILY
SSF52540
61 251 191 1.42E-15
IPR027417
CDD
cd01428
63 243 181 4.31E-37
IPR000850
PRINTS
PR00094
65 78 14 7.80E-08
IPR000850
Pfam
PF00406
66 232 167 1.30E-22 –
PRINTS
PR00094
93 107 15 7.80E-08
IPR000850
PRINTS
PR00094
144 160 17 7.80E-08
IPR000850
ProSitePatterns
PS00113
144 155 12 –
IPR033690
PRINTS
PR00094
217 231 15 7.80E-08
IPR000850

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006139
Biological process Nucleobase-containing compound metabolic process Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
Subterm of
GO:0019205
Molecular function Nucleobase-containing compound kinase activity Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate.
Subterm of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj1g3v3834180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3834180.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.