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Lj1g3v3918040.1

Overview

Field Value
Gene ID Lj1g3v3918040
Transcript ID Lj1g3v3918040.1
Lotus japonicus genome version MG20 v3.0
Description Chalcone synthase [Medicago truncatula] gi|357508471|ref|XP_003624524.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11877:SF27
1 327 327 1.90E-238 –
CDD
cd00831
1 321 321 6.41E-143 –
Gene3D
G3DSA:3.40.47.10
1 171 171 6.80E-86
IPR016039
PANTHER
PTHR11877
1 327 327 1.90E-238 –
Pfam
PF00195
1 165 165 5.40E-94
IPR001099
PIRSF
PIRSF000451
1 326 326 6.50E-119
IPR011141
SUPERFAMILY
SSF53901
1 169 169 3.67E-60
IPR016039
ProSitePatterns
PS00441
93 109 17 –
IPR018088
SUPERFAMILY
SSF53901
172 324 153 5.76E-50
IPR016039
Gene3D
G3DSA:3.40.47.10
173 324 152 6.10E-59
IPR016039
Pfam
PF02797
175 325 151 9.30E-70
IPR012328
Coils
Coil
247 267 21 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0009058
Biological process Biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Subterm of
GO:0016746
Molecular function Transferase activity, transferring acyl groups Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
Subterm of
GO:0016747
Molecular function Transferase activity, transferring acyl groups other than amino-acyl groups Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj1g3v3918040.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3918040.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.