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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011141
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We have found 111 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 7.884s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v0116650.2
n.a. PREDICTED: chalcone synthase [Glycine max] gi|356538729|ref|XP_003537853.1| chr1 1429923 1431682 -
2 domain predictions
2 GO terms
Lj1g3v0898850.1
n.a. PREDICTED: chalcone synthase 2-like [Glycine max] gi|356515949|ref|XP_003526659.1| chr1 11450570 11452641 +
2 domain predictions
2 GO terms
Lj1g3v2626190.1
n.a. chalcone synthase 1 [Astragalus membranaceus] gi|325911190|gb|ADZ45299.1| chr1 30506865 30508521 -
2 domain predictions
2 GO terms
Lj1g3v2626200.1
n.a. chalcone synthase 1 [Astragalus membranaceus] gi|325911190|gb|ADZ45299.1| chr1 30510792 30512374 +
2 domain predictions
2 GO terms
Lj1g3v3918040.1
n.a. Chalcone synthase [Medicago truncatula] gi|357508471|ref|XP_003624524.1| chr1 45721334 45723528 -
2 domain predictions
2 GO terms
Lj1g3v3918050.1
n.a. Chalcone synthase [Medicago truncatula] gi|357508471|ref|XP_003624524.1| chr1 45721533 45723528 -
2 domain predictions
2 GO terms
Lj2g3v2124310.1
n.a. chalcone synthase [Glycyrrhiza uralensis] gi|122725488|gb|ABM66532.1| chr2 31913466 31915015 -
2 domain predictions
2 GO terms
Lj2g3v2124320.2
n.a. chalcone synthase 1 [Astragalus membranaceus] gi|325911190|gb|ADZ45299.1| chr2 31917080 31920418 +
2 domain predictions
2 GO terms
Lj3g3v3541740.1
n.a. PREDICTED: chalcone synthase-like [Cicer arietinum] gi|502144397|ref|XP_004505681.1| chr3 43238523 43240355 -
2 domain predictions
2 GO terms
Lj4g3v2574990.1
n.a. chalcone synthase CHS4 [Glycine max] gi|34148079|gb|AAQ62588.1| chr4 34453368 34455244 -
2 domain predictions
2 GO terms
LotjaGi1g1v0131500.1
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0131500 LjG1.1_chr1 21107597 21109177 +
3 domain predictions
2 GO terms
LotjaGi1g1v0131500.2
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0131500 LjG1.1_chr1 21107654 21109177 +
3 domain predictions
2 GO terms
LotjaGi1g1v0131500.3
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0131500 LjG1.1_chr1 21107739 21109275 +
3 domain predictions
2 GO terms
LotjaGi1g1v0131500.4
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0131500 LjG1.1_chr1 21107880 21109177 +
3 domain predictions
2 GO terms
LotjaGi1g1v0131500.5
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0131500 LjG1.1_chr1 21108266 21109177 +
2 domain predictions
2 GO terms
LotjaGi1g1v0131500.6
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0131500 LjG1.1_chr1 21108479 21109186 +
2 domain predictions
2 GO terms
LotjaGi1g1v0268400.1
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|Q9SBL5|CHS4_SORBI Chalcone synthase 4; TrEMBL-Plants: tr|A0A072V123|A0A072V123_MEDTR Chalcone and stilbene synthase family protein; Found in the gene: LotjaGi1g1v0268400 LjG1.1_chr1 65495708 65499312 -
3 domain predictions
2 GO terms
LotjaGi1g1v0268400.2
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P48385|CHSY_CALCH Chalcone synthase; TrEMBL-Plants: tr|V7AZ15|V7AZ15_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0268400 LjG1.1_chr1 65495866 65499314 -
3 domain predictions
2 GO terms
LotjaGi1g1v0470600.1
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0470600 LjG1.1_chr1 98121651 98126168 -
2 domain predictions
2 GO terms
LotjaGi1g1v0470600.2
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0470600 LjG1.1_chr1 98122985 98126168 -
2 domain predictions
2 GO terms
LotjaGi1g1v0470600.3
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0470600 LjG1.1_chr1 98124374 98126152 -
3 domain predictions
2 GO terms
LotjaGi1g1v0470800.1
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0470800 LjG1.1_chr1 98128441 98130029 +
3 domain predictions
2 GO terms
LotjaGi1g1v0470800.2
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30074|CHS2_MEDSA Chalcone synthase 2; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0470800 LjG1.1_chr1 98128459 98130481 +
2 domain predictions
2 GO terms
LotjaGi1g1v0470800.3
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0470800 LjG1.1_chr1 98128477 98130038 +
3 domain predictions
2 GO terms
LotjaGi1g1v0470800.4
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30074|CHS2_MEDSA Chalcone synthase 2; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0470800 LjG1.1_chr1 98128658 98130029 +
2 domain predictions
2 GO terms
LotjaGi1g1v0470800.5
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|F2Y9R4|F2Y9R4_ASTME Chalcone synthase 1; Found in the gene: LotjaGi1g1v0470800 LjG1.1_chr1 98129118 98130029 +
2 domain predictions
2 GO terms
LotjaGi1g1v0470800.6
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|G7IAK9|G7IAK9_MEDTR Chalcone and stilbene synthase family protein; Found in the gene: LotjaGi1g1v0470800 LjG1.1_chr1 98129331 98130038 +
2 domain predictions
2 GO terms
LotjaGi1g1v0599400.1
n.a. Chalcone synthase; TAIR: AT1G02050.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|O23674|PKSA_ARATH Type III polyketide synthase A; TrEMBL-Plants: tr|I1J6D7|I1J6D7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0599400 LjG1.1_chr1 114145727 114147138 -
3 domain predictions
2 GO terms
LotjaGi1g1v0599400.2
n.a. Chalcone synthase; TAIR: AT1G02050.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|O23674|PKSA_ARATH Type III polyketide synthase A; TrEMBL-Plants: tr|A0A151U8E5|A0A151U8E5_CAJCA Chalcone synthase; Found in the gene: LotjaGi1g1v0599400 LjG1.1_chr1 114145727 114147138 -
3 domain predictions
2 GO terms
LotjaGi1g1v0635000.1
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|Q9XJ57|CHS2_CITSI Chalcone synthase 2; TrEMBL-Plants: tr|G7KXB8|G7KXB8_MEDTR Chalcone and stilbene synthase family protein; Found in the gene: LotjaGi1g1v0635000 LjG1.1_chr1 118984809 118986943 -
3 domain predictions
2 GO terms
LotjaGi1g1v0635000.2
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P51075|CHSY_BETPN Chalcone synthase; TrEMBL-Plants: tr|A0A151R6F9|A0A151R6F9_CAJCA Chalcone synthase; Found in the gene: LotjaGi1g1v0635000 LjG1.1_chr1 118985134 118985847 -
2 domain predictions
2 GO terms
LotjaGi2g1v0122800.1
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0122800 LjG1.1_chr2 45158299 45159006 -
2 domain predictions
2 GO terms
LotjaGi2g1v0122800.2
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0122800 LjG1.1_chr2 45158299 45159817 -
2 domain predictions
2 GO terms
LotjaGi2g1v0122800.3
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0122800 LjG1.1_chr2 45158308 45159219 -
2 domain predictions
2 GO terms
LotjaGi2g1v0122800.4
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0122800 LjG1.1_chr2 45158308 45159840 -
3 domain predictions
2 GO terms
LotjaGi2g1v0122800.5
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0122800 LjG1.1_chr2 45158308 45159904 -
3 domain predictions
2 GO terms
LotjaGi2g1v0123200_LC.1
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P23569|CHSY_PUEML Chalcone synthase; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0123200_LC LjG1.1_chr2 45206308 45207902 +
2 domain predictions
2 GO terms
LotjaGi2g1v0123200_LC.2
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P23569|CHSY_PUEML Chalcone synthase; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0123200_LC LjG1.1_chr2 45206372 45207902 +
2 domain predictions
2 GO terms
LotjaGi2g1v0123200_LC.3
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P23569|CHSY_PUEML Chalcone synthase; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0123200_LC LjG1.1_chr2 45206395 45207902 +
2 domain predictions
2 GO terms
LotjaGi2g1v0123200_LC.4
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P23569|CHSY_PUEML Chalcone synthase; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0123200_LC LjG1.1_chr2 45206395 45207975 +
2 domain predictions
2 GO terms
LotjaGi2g1v0123200_LC.5
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P23569|CHSY_PUEML Chalcone synthase; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0123200_LC LjG1.1_chr2 45206592 45207819 +
2 domain predictions
2 GO terms
LotjaGi2g1v0123200_LC.6
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P23569|CHSY_PUEML Chalcone synthase; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0123200_LC LjG1.1_chr2 45206592 45207902 +
2 domain predictions
2 GO terms
LotjaGi2g1v0446700.1
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P23569|CHSY_PUEML Chalcone synthase; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0446700 LjG1.1_chr2 94134378 94135978 +
3 domain predictions
2 GO terms
LotjaGi2g1v0446700.2
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P23569|CHSY_PUEML Chalcone synthase; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0446700 LjG1.1_chr2 94134432 94136440 +
3 domain predictions
2 GO terms
LotjaGi2g1v0446700.3
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P23569|CHSY_PUEML Chalcone synthase; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0446700 LjG1.1_chr2 94134445 94135978 +
3 domain predictions
2 GO terms
LotjaGi2g1v0446700.4
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P23569|CHSY_PUEML Chalcone synthase; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0446700 LjG1.1_chr2 94134663 94135978 +
3 domain predictions
2 GO terms
LotjaGi2g1v0446700.5
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P51084|CHS2_TRISU Chalcone synthase 2; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0446700 LjG1.1_chr2 94135067 94135978 +
2 domain predictions
2 GO terms
LotjaGi2g1v0446800.1
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0446800 LjG1.1_chr2 94139371 94141212 -
3 domain predictions
2 GO terms
LotjaGi2g1v0446800.2
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|G7IAK9|G7IAK9_MEDTR Chalcone and stilbene synthase family protein; Found in the gene: LotjaGi2g1v0446800 LjG1.1_chr2 94139710 94140417 -
2 domain predictions
2 GO terms
LotjaGi2g1v0446800.3
n.a. Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P51083|CHS1_TRISU Chalcone synthase 1; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0446800 LjG1.1_chr2 94139719 94140630 -
2 domain predictions
2 GO terms