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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3918150 |
| Transcript ID | Lj1g3v3918150.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1-like [Glycine max] gi|356571647|ref|XP_003553987.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 361 | 361 | – | – | |
| SUPERFAMILY | 33 | 183 | 151 | 1.44E-32 | ||
| Gene3D | 37 | 176 | 140 | 4.80E-29 | ||
| ProSiteProfiles | 38 | 73 | 36 | 7.261 | ||
| SMART | 42 | 70 | 29 | 11 | ||
| ProSiteProfiles | 74 | 109 | 36 | 10.106 | ||
| SMART | 78 | 106 | 29 | 2 | ||
| Pfam | 79 | 105 | 27 | 0.01 | ||
| ProSitePatterns | 87 | 99 | 13 | – | ||
| Pfam | 109 | 168 | 60 | 4.90E-10 | ||
| SMART | 109 | 137 | 29 | 16 | ||
| CDD | 109 | 170 | 62 | 6.28E-11 | ||
| ProSiteProfiles | 110 | 140 | 31 | 7.623 | ||
| ProSiteProfiles | 141 | 176 | 36 | 13.035 | ||
| PANTHER | 144 | 168 | 25 | 2.30E-189 | – | |
| PANTHER | 144 | 168 | 25 | 2.30E-189 | – | |
| SMART | 145 | 173 | 29 | 1.3 | ||
| ProSitePatterns | 154 | 166 | 13 | – | ||
| SUPERFAMILY | 207 | 480 | 274 | 1.83E-79 | ||
| Gene3D | 208 | 484 | 277 | 4.30E-92 | ||
| Pfam | 208 | 294 | 87 | 1.50E-24 | ||
| ProSiteProfiles | 208 | 291 | 84 | 19.703 | ||
| PRINTS | 213 | 226 | 14 | 2.20E-28 | ||
| PANTHER | 214 | 486 | 273 | 2.30E-189 | – | |
| PANTHER | 214 | 486 | 273 | 2.30E-189 | – | |
| PRINTS | 226 | 240 | 15 | 2.20E-28 | ||
| PRINTS | 266 | 286 | 21 | 2.20E-28 | ||
| Pfam | 304 | 394 | 91 | 3.80E-23 | ||
| ProSiteProfiles | 304 | 391 | 88 | 21.741 | ||
| PRINTS | 319 | 337 | 19 | 2.20E-28 | ||
| Phobius | 362 | 385 | 24 | – | – | |
| TMHMM | 363 | 385 | 23 | – | – | |
| PRINTS | 364 | 382 | 19 | 2.20E-28 | ||
| Phobius | 386 | 404 | 19 | – | – | |
| ProSiteProfiles | 402 | 485 | 84 | 24.015 | ||
| Pfam | 403 | 486 | 84 | 7.50E-24 | ||
| Phobius | 405 | 425 | 21 | – | – | |
| TMHMM | 405 | 427 | 23 | – | – | |
| PRINTS | 411 | 433 | 23 | 2.20E-28 | ||
| Phobius | 426 | 489 | 64 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP transmembrane transporter activity | Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3918150.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3918150.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.