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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3979320 |
| Transcript ID | Lj1g3v3979320.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cationic amino acid transporter 4, vacuolar-like [Cicer arietinum] gi|502107278|ref|XP_004493214.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 48 | 48 | – | – | |
| PANTHER | 17 | 437 | 421 | 0 | ||
| PANTHER | 17 | 437 | 421 | 0 | – | |
| Pfam | 49 | 431 | 383 | 5.90E-54 | ||
| Phobius | 49 | 71 | 23 | – | – | |
| TMHMM | 52 | 74 | 23 | – | – | |
| Phobius | 72 | 82 | 11 | – | – | |
| TMHMM | 79 | 101 | 23 | – | – | |
| Phobius | 83 | 102 | 20 | – | – | |
| Phobius | 103 | 113 | 11 | – | – | |
| TMHMM | 114 | 136 | 23 | – | – | |
| Phobius | 114 | 135 | 22 | – | – | |
| Phobius | 136 | 174 | 39 | – | – | |
| Phobius | 175 | 198 | 24 | – | – | |
| TMHMM | 175 | 197 | 23 | – | – | |
| Phobius | 199 | 209 | 11 | – | – | |
| TMHMM | 204 | 226 | 23 | – | – | |
| Phobius | 210 | 235 | 26 | – | – | |
| Phobius | 236 | 240 | 5 | – | – | |
| TMHMM | 241 | 263 | 23 | – | – | |
| Phobius | 241 | 263 | 23 | – | – | |
| Phobius | 264 | 283 | 20 | – | – | |
| Phobius | 284 | 308 | 25 | – | – | |
| TMHMM | 284 | 306 | 23 | – | – | |
| Phobius | 309 | 327 | 19 | – | – | |
| TMHMM | 328 | 350 | 23 | – | – | |
| Phobius | 328 | 350 | 23 | – | – | |
| Phobius | 351 | 377 | 27 | – | – | |
| Phobius | 378 | 396 | 19 | – | – | |
| TMHMM | 378 | 397 | 20 | – | – | |
| Phobius | 397 | 401 | 5 | – | – | |
| Phobius | 402 | 424 | 23 | – | – | |
| TMHMM | 402 | 424 | 23 | – | – | |
| Phobius | 425 | 502 | 78 | – | – | |
| Phobius | 503 | 524 | 22 | – | – | |
| TMHMM | 503 | 525 | 23 | – | – | |
| Phobius | 525 | 529 | 5 | – | – | |
| TMHMM | 530 | 552 | 23 | – | – | |
| Phobius | 530 | 553 | 24 | – | – | |
| PANTHER | 553 | 638 | 86 | 0 | – | |
| PANTHER | 553 | 638 | 86 | 0 | ||
| Phobius | 554 | 564 | 11 | – | – | |
| Phobius | 565 | 589 | 25 | – | – | |
| TMHMM | 565 | 587 | 23 | – | – | |
| Pfam | 568 | 618 | 51 | 6.00E-23 | ||
| Phobius | 590 | 594 | 5 | – | – | |
| TMHMM | 592 | 614 | 23 | – | – | |
| Phobius | 595 | 613 | 19 | – | – | |
| Phobius | 614 | 643 | 30 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3979320.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3979320.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.