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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3979330 |
| Transcript ID | Lj1g3v3979330.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cationic amino acid transporter 3-like [Glycine max] gi|356570337|ref|XP_003553346.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 42 | 42 | – | – | |
| PANTHER | 11 | 431 | 421 | 0 | ||
| PANTHER | 11 | 431 | 421 | 0 | – | |
| TMHMM | 43 | 65 | 23 | – | – | |
| Phobius | 43 | 65 | 23 | – | – | |
| Pfam | 43 | 425 | 383 | 1.30E-52 | ||
| Phobius | 66 | 76 | 11 | – | – | |
| Phobius | 77 | 96 | 20 | – | – | |
| TMHMM | 77 | 99 | 23 | – | – | |
| Phobius | 97 | 107 | 11 | – | – | |
| Phobius | 108 | 129 | 22 | – | – | |
| TMHMM | 109 | 130 | 22 | – | – | |
| Phobius | 130 | 170 | 41 | – | – | |
| TMHMM | 137 | 154 | 18 | – | – | |
| TMHMM | 169 | 191 | 23 | – | – | |
| Phobius | 171 | 190 | 20 | – | – | |
| Phobius | 191 | 196 | 6 | – | – | |
| Phobius | 197 | 222 | 26 | – | – | |
| TMHMM | 198 | 220 | 23 | – | – | |
| Phobius | 223 | 241 | 19 | – | – | |
| TMHMM | 235 | 257 | 23 | – | – | |
| Phobius | 242 | 261 | 20 | – | – | |
| Phobius | 262 | 281 | 20 | – | – | |
| TMHMM | 278 | 300 | 23 | – | – | |
| Phobius | 282 | 305 | 24 | – | – | |
| Phobius | 306 | 324 | 19 | – | – | |
| TMHMM | 322 | 344 | 23 | – | – | |
| Phobius | 325 | 345 | 21 | – | – | |
| Phobius | 346 | 371 | 26 | – | – | |
| TMHMM | 372 | 391 | 20 | – | – | |
| Phobius | 372 | 390 | 19 | – | – | |
| Phobius | 391 | 395 | 5 | – | – | |
| Phobius | 396 | 418 | 23 | – | – | |
| TMHMM | 396 | 418 | 23 | – | – | |
| Phobius | 419 | 498 | 80 | – | – | |
| Phobius | 499 | 519 | 21 | – | – | |
| TMHMM | 499 | 521 | 23 | – | – | |
| Phobius | 520 | 524 | 5 | – | – | |
| Phobius | 525 | 548 | 24 | – | – | |
| TMHMM | 526 | 548 | 23 | – | – | |
| PANTHER | 548 | 639 | 92 | 0 | – | |
| PANTHER | 548 | 639 | 92 | 0 | ||
| Phobius | 549 | 559 | 11 | – | – | |
| Phobius | 560 | 584 | 25 | – | – | |
| TMHMM | 561 | 583 | 23 | – | – | |
| Pfam | 563 | 613 | 51 | 7.40E-21 | ||
| Phobius | 585 | 589 | 5 | – | – | |
| TMHMM | 587 | 609 | 23 | – | – | |
| Phobius | 590 | 608 | 19 | – | – | |
| Phobius | 609 | 639 | 31 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3979330.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3979330.1, powered by CORGI.
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