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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3980440 |
| Transcript ID | Lj1g3v3980440.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Cation/calcium exchanger [Medicago truncatula] gi|357508857|ref|XP_003624717.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | – | – | |
| TMHMM | 21 | 43 | 23 | – | – | |
| PANTHER | 23 | 591 | 569 | 0 | – | |
| PANTHER | 23 | 591 | 569 | 0 | – | |
| Phobius | 25 | 45 | 21 | – | – | |
| Phobius | 46 | 108 | 63 | – | – | |
| Phobius | 109 | 131 | 23 | – | – | |
| TMHMM | 109 | 131 | 23 | – | – | |
| Pfam | 121 | 266 | 146 | 5.50E-22 | ||
| Phobius | 132 | 151 | 20 | – | – | |
| Phobius | 152 | 175 | 24 | – | – | |
| TMHMM | 152 | 174 | 23 | – | – | |
| Phobius | 176 | 186 | 11 | – | – | |
| Phobius | 187 | 211 | 25 | – | – | |
| TMHMM | 189 | 211 | 23 | – | – | |
| Phobius | 212 | 222 | 11 | – | – | |
| Phobius | 223 | 242 | 20 | – | – | |
| TMHMM | 223 | 242 | 20 | – | – | |
| Phobius | 243 | 247 | 5 | – | – | |
| TMHMM | 246 | 268 | 23 | – | – | |
| Phobius | 248 | 267 | 20 | – | – | |
| Phobius | 268 | 362 | 95 | – | – | |
| Phobius | 363 | 380 | 18 | – | – | |
| Phobius | 381 | 391 | 11 | – | – | |
| TMHMM | 392 | 414 | 23 | – | – | |
| Phobius | 392 | 413 | 22 | – | – | |
| Phobius | 414 | 424 | 11 | – | – | |
| TMHMM | 424 | 443 | 20 | – | – | |
| Phobius | 425 | 442 | 18 | – | – | |
| Pfam | 428 | 582 | 155 | 7.50E-25 | ||
| Phobius | 443 | 447 | 5 | – | – | |
| Phobius | 448 | 473 | 26 | – | – | |
| TMHMM | 450 | 472 | 23 | – | – | |
| Phobius | 474 | 493 | 20 | – | – | |
| Phobius | 494 | 516 | 23 | – | – | |
| Phobius | 517 | 535 | 19 | – | – | |
| TMHMM | 535 | 557 | 23 | – | – | |
| Phobius | 536 | 555 | 20 | – | – | |
| Phobius | 556 | 561 | 6 | – | – | |
| Phobius | 562 | 583 | 22 | – | – | |
| TMHMM | 564 | 583 | 20 | – | – | |
| Phobius | 584 | 597 | 14 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3980440.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3980440.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.