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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4058560 |
| Transcript ID | Lj1g3v4058560.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Cystinosin/ERS1p repeat [Medicago truncatula] gi|124359535|gb|ABD28651.2| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | – | – | |
| PANTHER | 11 | 93 | 83 | 9.70E-64 | – | |
| PANTHER | 11 | 93 | 83 | 9.70E-64 | – | |
| TMHMM | 15 | 37 | 23 | – | – | |
| Phobius | 20 | 39 | 20 | – | – | |
| Phobius | 40 | 251 | 212 | – | – | |
| PANTHER | 126 | 307 | 182 | 9.70E-64 | – | |
| PANTHER | 126 | 307 | 182 | 9.70E-64 | – | |
| Pfam | 217 | 275 | 59 | 2.90E-16 | ||
| SMART | 231 | 262 | 32 | 2.00E-09 | ||
| TMHMM | 249 | 271 | 23 | – | – | |
| Phobius | 252 | 272 | 21 | – | – | |
| Phobius | 273 | 283 | 11 | – | – | |
| Phobius | 284 | 305 | 22 | – | – | |
| TMHMM | 286 | 308 | 23 | – | – | |
| Phobius | 306 | 313 | 8 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v4058560.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4058560.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.