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Lj1g3v4154900.3

Overview

Field Value
Gene ID Lj1g3v4154900
Transcript ID Lj1g3v4154900.3
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ferredoxin-dependent glutamate synthase 1, chloroplastic-like isoform X1 [Cicer arietinum] gi|502108182|ref|XP_004493407.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11938:SF94
1 546 546 0 –
PANTHER
PTHR11938
1 546 546 0 –
Gene3D
G3DSA:3.60.20.10
2 40 39 0.001
IPR029055
Gene3D
G3DSA:3.20.20.70
42 398 357 9.10E-103
IPR013785
SUPERFAMILY
SSF51395
53 545 493 2.87E-140 –
Pfam
PF04898
58 350 293 4.30E-107
IPR006982
Pfam
PF01645
409 522 114 1.20E-31
IPR002932
Gene3D
G3DSA:3.20.20.70
423 546 124 1.10E-27
IPR013785

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0006537
Biological process Glutamate biosynthetic process The chemical reactions and pathways resulting in the formation of glutamate, the anion of 2-aminopentanedioic acid.
Subterm of
GO:0006807
Biological process Nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
Subterm of
GO:0015930
Molecular function Glutamate synthase activity Catalysis of the formation of L-glutamine and 2-oxoglutarate from L-glutamate, using NADH, NADPH or ferredoxin as hydrogen acceptors.
Subterm of
GO:0016638
Molecular function Oxidoreductase activity, acting on the CH-NH2 group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

LORE1 insertions 114

Expression data

Expression pattern

Expression pattern of Lj1g3v4154900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4154900.3, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.