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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4405490 |
| Transcript ID | Lj1g3v4405490.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: sugar transporter ERD6-like 7-like [Glycine max] gi|356503511|ref|XP_003520551.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 92 | 92 | 1.50E-48 | – | |
| PANTHER | 1 | 92 | 92 | 1.50E-48 | – | |
| Phobius | 1 | 31 | 31 | – | – | |
| Pfam | 2 | 83 | 82 | 3.20E-17 | ||
| SUPERFAMILY | 3 | 74 | 72 | 6.93E-07 | ||
| Gene3D | 5 | 75 | 71 | 1.70E-06 | – | |
| TMHMM | 27 | 49 | 23 | – | – | |
| Phobius | 32 | 50 | 19 | – | – | |
| ProSitePatterns | 45 | 62 | 18 | – | ||
| Phobius | 51 | 56 | 6 | – | – | |
| TMHMM | 56 | 78 | 23 | – | – | |
| Phobius | 57 | 78 | 22 | – | – | |
| Phobius | 79 | 92 | 14 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v4405490.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4405490.1, powered by CORGI.
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