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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4431080 |
| Transcript ID | Lj1g3v4431080.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: preprotein translocase subunit SCY2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502109502|ref|XP_004493661.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 32 | 32 | – | – | |
| Phobius | 1 | 142 | 142 | – | – | |
| PANTHER | 105 | 563 | 459 | 2.40E-218 | – | |
| PANTHER | 105 | 563 | 459 | 2.40E-218 | ||
| SUPERFAMILY | 123 | 548 | 426 | 3.27E-82 | ||
| Gene3D | 131 | 561 | 431 | 7.40E-102 | ||
| TMHMM | 142 | 164 | 23 | – | – | |
| PRINTS | 143 | 161 | 19 | 1.40E-38 | – | |
| Phobius | 143 | 164 | 22 | – | – | |
| Phobius | 165 | 195 | 31 | – | – | |
| PRINTS | 194 | 214 | 21 | 1.40E-38 | – | |
| Pfam | 195 | 541 | 347 | 1.30E-68 | ||
| Phobius | 196 | 218 | 23 | – | – | |
| TMHMM | 200 | 222 | 23 | – | – | |
| Phobius | 219 | 237 | 19 | – | – | |
| PRINTS | 235 | 258 | 24 | 1.40E-38 | – | |
| Phobius | 238 | 260 | 23 | – | – | |
| TMHMM | 242 | 264 | 23 | – | – | |
| Phobius | 261 | 271 | 11 | – | – | |
| PRINTS | 270 | 295 | 26 | 1.40E-38 | – | |
| Phobius | 272 | 291 | 20 | – | – | |
| TMHMM | 274 | 291 | 18 | – | – | |
| Phobius | 292 | 297 | 6 | – | – | |
| PRINTS | 296 | 319 | 24 | 1.40E-38 | – | |
| Phobius | 298 | 316 | 19 | – | – | |
| TMHMM | 298 | 317 | 20 | – | – | |
| Phobius | 317 | 335 | 19 | – | – | |
| TMHMM | 332 | 354 | 23 | – | – | |
| Phobius | 336 | 354 | 19 | – | – | |
| Phobius | 355 | 398 | 44 | – | – | |
| PRINTS | 394 | 413 | 20 | 1.40E-38 | – | |
| Phobius | 399 | 420 | 22 | – | – | |
| TMHMM | 399 | 421 | 23 | – | – | |
| Phobius | 421 | 439 | 19 | – | – | |
| TMHMM | 439 | 461 | 23 | – | – | |
| PRINTS | 439 | 461 | 23 | 1.40E-38 | – | |
| Phobius | 440 | 461 | 22 | – | – | |
| Phobius | 462 | 496 | 35 | – | – | |
| TMHMM | 497 | 516 | 20 | – | – | |
| Phobius | 497 | 516 | 20 | – | – | |
| Phobius | 517 | 521 | 5 | – | – | |
| TMHMM | 520 | 539 | 20 | – | – | |
| Phobius | 522 | 541 | 20 | – | – | |
| PRINTS | 527 | 545 | 19 | 1.40E-38 | – | |
| Phobius | 542 | 563 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein transport | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj1g3v4431080.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4431080.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.