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Field | Value |
---|---|
Gene ID | Lj1g3v4434270 |
Transcript ID | Lj1g3v4434270.3 |
Related isoforms 2 | |
Lotus japonicus genome version | MG20 v3.0 |
Description | PREDICTED: ent-copalyl diphosphate synthase, chloroplastic-like [Glycine max] gi|356503551|ref|XP_003520571.1| |
Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
SignalP | 1 | 29 | 29 | – | – | |
MobiDBLite | 1 | 71 | 71 | – | – | |
PANTHER | 72 | 826 | 755 | 0 | – | |
PANTHER | 72 | 826 | 755 | 0 | – | |
SFLD | 109 | 540 | 432 | 0 | – | |
SUPERFAMILY | 139 | 217 | 79 | 2.43E-06 | ||
Gene3D | 140 | 218 | 79 | 6.20E-07 | ||
Pfam | 296 | 502 | 207 | 2.10E-52 | ||
CDD | 307 | 823 | 517 | 7.27E-145 | – | |
SUPERFAMILY | 307 | 527 | 221 | 1.24E-66 | ||
Gene3D | 338 | 555 | 218 | 1.70E-71 | ||
SUPERFAMILY | 541 | 796 | 256 | 1.30E-28 | ||
Pfam | 546 | 697 | 152 | 4.70E-22 | ||
Gene3D | 556 | 698 | 143 | 1.50E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
Molecular function | Terpene synthase activity | Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. | ||
Molecular function | Lyase activity | Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring. |
Expression pattern of Lj1g3v4434270.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4434270.3, powered by CORGI.
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