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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4446890 |
| Transcript ID | Lj1g3v4446890.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Centromere protein [Medicago truncatula] gi|357440635|ref|XP_003590595.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 1832 | 1831 | 0 | – | |
| PANTHER | 2 | 1832 | 1831 | 0 | – | |
| ProSiteProfiles | 13 | 93 | 81 | 51.925 | ||
| Pfam | 14 | 87 | 74 | 2.60E-38 | ||
| Coils | 230 | 250 | 21 | – | – | |
| Coils | 272 | 313 | 42 | – | – | |
| Coils | 328 | 460 | 133 | – | – | |
| SUPERFAMILY | 407 | 646 | 240 | 8.50E-06 | – | |
| Coils | 475 | 495 | 21 | – | – | |
| Coils | 524 | 579 | 56 | – | – | |
| Coils | 587 | 642 | 56 | – | – | |
| Coils | 657 | 729 | 73 | – | – | |
| Coils | 744 | 771 | 28 | – | – | |
| Coils | 800 | 848 | 49 | – | – | |
| Coils | 937 | 957 | 21 | – | – | |
| Coils | 1026 | 1046 | 21 | – | – | |
| Coils | 1054 | 1081 | 28 | – | – | |
| Coils | 1117 | 1137 | 21 | – | – | |
| Coils | 1166 | 1186 | 21 | – | – | |
| Coils | 1208 | 1242 | 35 | – | – | |
| Coils | 1264 | 1284 | 21 | – | – | |
| Coils | 1292 | 1326 | 35 | – | – | |
| Coils | 1390 | 1410 | 21 | – | – | |
| MobiDBLite | 1527 | 1546 | 20 | – | – | |
| Coils | 1703 | 1723 | 21 | – | – | |
| MobiDBLite | 1725 | 1759 | 35 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Actin binding | Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments. |
Expression pattern of Lj1g3v4446890.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4446890.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.