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Lj1g3v4450440.1

Overview

Field Value
Gene ID Lj1g3v4450440
Transcript ID Lj1g3v4450440.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor UNE12-like [Glycine max] gi|356572238|ref|XP_003554277.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR16223:SF15
6 211 206 1.10E-152 –
PANTHER
PTHR16223
6 211 206 1.10E-152 –
MobiDBLite
mobidb-lite
87 145 59 – –
SUPERFAMILY
SSF47459
139 200 62 3.40E-15
IPR011598
ProSiteProfiles
PS50888
141 190 50 16.12
IPR011598
Gene3D
G3DSA:4.10.280.10
143 200 58 8.00E-15
IPR011598
Pfam
PF00010
146 190 45 2.80E-07
IPR011598
SMART
SM00353
147 196 50 9.50E-11
IPR011598
PANTHER
PTHR16223
231 296 66 1.10E-152 –
PANTHER
PTHR16223:SF15
231 296 66 1.10E-152 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 19

Expression data

Expression pattern

Expression pattern of Lj1g3v4450440.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4450440.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.