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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4528470 |
| Transcript ID | Lj1g3v4528470.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: WD repeat-containing protein 70-like [Glycine max] gi|356572299|ref|XP_003554306.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 612 | 612 | 6.10E-303 | – | |
| MobiDBLite | 1 | 128 | 128 | – | – | |
| PANTHER | 1 | 612 | 612 | 6.10E-303 | – | |
| SUPERFAMILY | 114 | 457 | 344 | 9.34E-53 | ||
| Gene3D | 123 | 458 | 336 | 5.20E-51 | ||
| SMART | 134 | 173 | 40 | 2.30E-06 | ||
| Pfam | 139 | 173 | 35 | 1.40E-04 | ||
| CDD | 140 | 459 | 320 | 2.50E-40 | – | |
| ProSiteProfiles | 141 | 182 | 42 | 11.712 | ||
| ProSiteProfiles | 141 | 378 | 238 | 26.841 | ||
| SMART | 183 | 220 | 38 | 6.4 | ||
| SMART | 232 | 275 | 44 | 0.17 | ||
| Pfam | 240 | 275 | 36 | 0.0013 | ||
| ProSiteProfiles | 242 | 284 | 43 | 10.976 | ||
| ProSitePatterns | 262 | 276 | 15 | – | ||
| PRINTS | 262 | 276 | 15 | 7.60E-06 | ||
| SMART | 285 | 323 | 39 | 0.31 | ||
| Pfam | 297 | 323 | 27 | 0.04 | ||
| ProSitePatterns | 310 | 324 | 15 | – | ||
| PRINTS | 310 | 324 | 15 | 7.60E-06 | ||
| SMART | 330 | 369 | 40 | 8.00E-05 | ||
| ProSiteProfiles | 337 | 378 | 42 | 14.485 | ||
| Pfam | 337 | 369 | 33 | 0.0016 | ||
| PRINTS | 356 | 370 | 15 | 7.60E-06 | ||
| MobiDBLite | 503 | 533 | 31 | – | – | |
| MobiDBLite | 590 | 612 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v4528470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4528470.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.