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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4528490 |
| Transcript ID | Lj1g3v4528490.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | high affinity ammonium transporter [Lotus japonicus] gi|46409004|emb|CAE01484.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 395 | 395 | 5.20E-111 | ||
| Pfam | 1 | 414 | 414 | 1.90E-130 | ||
| SUPERFAMILY | 1 | 395 | 395 | 2.09E-95 | ||
| TIGRFAM | 1 | 414 | 414 | 2.10E-133 | ||
| PANTHER | 1 | 419 | 419 | 0 | ||
| PANTHER | 1 | 419 | 419 | 0 | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| TMHMM | 21 | 43 | 23 | – | – | |
| Phobius | 21 | 47 | 27 | – | – | |
| Phobius | 48 | 66 | 19 | – | – | |
| Phobius | 67 | 86 | 20 | – | – | |
| TMHMM | 70 | 92 | 23 | – | – | |
| Phobius | 87 | 97 | 11 | – | – | |
| Phobius | 98 | 120 | 23 | – | – | |
| TMHMM | 99 | 121 | 23 | – | – | |
| Phobius | 121 | 139 | 19 | – | – | |
| Phobius | 140 | 163 | 24 | – | – | |
| TMHMM | 141 | 163 | 23 | – | – | |
| ProSitePatterns | 142 | 167 | 26 | – | ||
| Phobius | 164 | 183 | 20 | – | – | |
| Phobius | 184 | 202 | 19 | – | – | |
| TMHMM | 186 | 208 | 23 | – | – | |
| Phobius | 203 | 283 | 81 | – | – | |
| TMHMM | 228 | 250 | 23 | – | – | |
| TMHMM | 263 | 280 | 18 | – | – | |
| Phobius | 284 | 304 | 21 | – | – | |
| TMHMM | 284 | 303 | 20 | – | – | |
| Phobius | 305 | 315 | 11 | – | – | |
| TMHMM | 315 | 334 | 20 | – | – | |
| Phobius | 316 | 334 | 19 | – | – | |
| Phobius | 335 | 361 | 27 | – | – | |
| Phobius | 362 | 387 | 26 | – | – | |
| TMHMM | 365 | 387 | 23 | – | – | |
| Phobius | 388 | 431 | 44 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ammonium transmembrane transporter activity | Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Biological process | Ammonium transport | The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Ammonium transmembrane transport | The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+. |
Expression pattern of Lj1g3v4528490.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4528490.1, powered by CORGI.
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