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Lj1g3v4578890.1

Overview

Field Value
Gene ID Lj1g3v4578890
Transcript ID Lj1g3v4578890.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable adenylate kinase 1, chloroplastic-like [Cicer arietinum] gi|502111015|ref|XP_004493934.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP
SignalP-TM_GRAM_POSITIVE
1 21 21 – –
PANTHER
PTHR23359:SF94
13 265 253 1.60E-167 –
PANTHER
PTHR23359
13 265 253 1.60E-167
IPR000850
Hamap
MF_00235
36 256 221 38.459
IPR000850
Gene3D
G3DSA:3.40.50.300
36 256 221 1.70E-56
IPR027417
CDD
cd01428
37 239 203 5.36E-70
IPR000850
TIGRFAM
TIGR01351
37 255 219 2.00E-65
IPR006259
SUPERFAMILY
SSF52540
38 159 122 1.33E-26
IPR027417
PRINTS
PR00094
39 52 14 1.30E-26
IPR000850
Pfam
PF00406
41 233 193 7.10E-38 –
PRINTS
PR00094
67 81 15 1.30E-26
IPR000850
PRINTS
PR00094
118 134 17 1.30E-26
IPR000850
ProSitePatterns
PS00113
118 129 12 –
IPR033690
PRINTS
PR00094
203 218 16 1.30E-26
IPR000850
SUPERFAMILY
SSF52540
205 255 51 1.33E-26
IPR027417
PRINTS
PR00094
220 234 15 1.30E-26
IPR000850

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004017
Molecular function Adenylate kinase activity Catalysis of the reaction: ATP + AMP = 2 ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006139
Biological process Nucleobase-containing compound metabolic process Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
Subterm of
GO:0016776
Molecular function Phosphotransferase activity, phosphate group as acceptor Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor).
Subterm of
GO:0019205
Molecular function Nucleobase-containing compound kinase activity Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate.
Subterm of

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj1g3v4578890.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4578890.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.