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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4579510 |
| Transcript ID | Lj1g3v4579510.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Aquaporin PIP2-1 [Medicago truncatula] gi|357510677|ref|XP_003625627.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 42 | 42 | – | – | |
| PANTHER | 6 | 275 | 270 | 1.30E-201 | ||
| PANTHER | 6 | 275 | 270 | 1.30E-201 | – | |
| Gene3D | 13 | 276 | 264 | 2.10E-88 | ||
| Pfam | 33 | 268 | 236 | 1.20E-81 | ||
| SUPERFAMILY | 33 | 273 | 241 | 1.16E-63 | ||
| CDD | 41 | 271 | 231 | 3.93E-75 | ||
| PRINTS | 41 | 60 | 20 | 3.40E-68 | ||
| TMHMM | 42 | 64 | 23 | – | – | |
| Phobius | 43 | 64 | 22 | – | – | |
| TIGRFAM | 45 | 267 | 223 | 1.70E-60 | ||
| Phobius | 65 | 83 | 19 | – | – | |
| TMHMM | 79 | 101 | 23 | – | – | |
| Phobius | 84 | 106 | 23 | – | – | |
| PRINTS | 89 | 113 | 25 | 3.40E-68 | ||
| ProSitePatterns | 107 | 115 | 9 | – | ||
| Phobius | 107 | 126 | 20 | – | – | |
| TMHMM | 122 | 144 | 23 | – | – | |
| PRINTS | 126 | 145 | 20 | 3.40E-68 | ||
| Phobius | 127 | 148 | 22 | – | – | |
| Phobius | 149 | 171 | 23 | – | – | |
| TMHMM | 170 | 189 | 20 | – | – | |
| Phobius | 172 | 190 | 19 | – | – | |
| PRINTS | 175 | 193 | 19 | 3.40E-68 | ||
| Phobius | 191 | 201 | 11 | – | – | |
| Phobius | 202 | 224 | 23 | – | – | |
| TMHMM | 202 | 224 | 23 | – | – | |
| PRINTS | 211 | 233 | 23 | 3.40E-68 | ||
| Phobius | 225 | 250 | 26 | – | – | |
| TMHMM | 250 | 272 | 23 | – | – | |
| PRINTS | 251 | 271 | 21 | 3.40E-68 | ||
| Phobius | 251 | 272 | 22 | – | – | |
| Phobius | 273 | 289 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v4579510.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4579510.1, powered by CORGI.
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