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Lj1g3v4591190.1

Overview

Field Value
Gene ID Lj1g3v4591190
Transcript ID Lj1g3v4591190.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: microtubule-associated protein 1B-like [Cicer arietinum] gi|502111232|ref|XP_004493993.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR22814
1 86 86 7.00E-105 –
PANTHER
PTHR22814:SF113
1 86 86 7.00E-105 –
Gene3D
G3DSA:3.30.70.100
14 77 64 1.50E-15 –
SUPERFAMILY
SSF55008
15 76 62 3.93E-13
IPR006121
Pfam
PF00403
20 70 51 4.20E-13
IPR006121
CDD
cd00371
21 76 56 9.16E-09
IPR006121
ProSiteProfiles
PS50846
21 69 49 10.16
IPR006121
MobiDBLite
mobidb-lite
71 128 58 – –
PANTHER
PTHR22814:SF113
106 194 89 7.00E-105 –
PANTHER
PTHR22814
106 194 89 7.00E-105 –
Gene3D
G3DSA:3.30.70.100
128 195 68 5.30E-10 –
SUPERFAMILY
SSF55008
131 187 57 3.01E-07
IPR006121
Pfam
PF00403
133 193 61 6.00E-09
IPR006121
CDD
cd00371
138 191 54 1.14E-05
IPR006121
MobiDBLite
mobidb-lite
200 231 32 – –
PANTHER
PTHR22814:SF113
238 339 102 7.00E-105 –
PANTHER
PTHR22814
238 339 102 7.00E-105 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0030001
Biological process Metal ion transport The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Subterm of
GO:0046872
Molecular function Metal ion binding Interacting selectively and non-covalently with any metal ion.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj1g3v4591190.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4591190.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.