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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4668070 |
| Transcript ID | Lj1g3v4668070.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | – | – | |
| PANTHER | 3 | 251 | 249 | 2.10E-165 | – | |
| PANTHER | 3 | 251 | 249 | 2.10E-165 | ||
| SUPERFAMILY | 13 | 240 | 228 | 5.89E-68 | ||
| Gene3D | 13 | 242 | 230 | 8.40E-70 | ||
| Pfam | 14 | 233 | 220 | 8.10E-75 | ||
| PRINTS | 21 | 40 | 20 | 4.10E-53 | ||
| CDD | 21 | 236 | 216 | 7.42E-66 | ||
| TMHMM | 22 | 44 | 23 | – | – | |
| Phobius | 23 | 44 | 22 | – | – | |
| TIGRFAM | 25 | 233 | 209 | 3.20E-51 | ||
| Phobius | 45 | 55 | 11 | – | – | |
| TMHMM | 51 | 73 | 23 | – | – | |
| Phobius | 56 | 75 | 20 | – | – | |
| PRINTS | 65 | 89 | 25 | 4.10E-53 | ||
| Phobius | 76 | 86 | 11 | – | – | |
| ProSitePatterns | 83 | 91 | 9 | – | ||
| TMHMM | 83 | 105 | 23 | – | – | |
| Phobius | 87 | 108 | 22 | – | – | |
| PRINTS | 102 | 121 | 20 | 4.10E-53 | ||
| Phobius | 109 | 114 | 6 | – | – | |
| TMHMM | 112 | 134 | 23 | – | – | |
| Phobius | 115 | 138 | 24 | – | – | |
| Phobius | 139 | 143 | 5 | – | – | |
| Phobius | 144 | 163 | 20 | – | – | |
| TMHMM | 144 | 163 | 20 | – | – | |
| PRINTS | 146 | 164 | 19 | 4.10E-53 | ||
| Phobius | 164 | 169 | 6 | – | – | |
| TMHMM | 170 | 192 | 23 | – | – | |
| Phobius | 170 | 192 | 23 | – | – | |
| PRINTS | 179 | 201 | 23 | 4.10E-53 | ||
| Phobius | 193 | 215 | 23 | – | – | |
| PRINTS | 216 | 236 | 21 | 4.10E-53 | ||
| TMHMM | 216 | 238 | 23 | – | – | |
| Phobius | 216 | 236 | 21 | – | – | |
| Phobius | 237 | 251 | 15 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v4668070.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4668070.1, powered by CORGI.
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