Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj1g3v4730340.1

Overview

Field Value
Gene ID Lj1g3v4730340
Transcript ID Lj1g3v4730340.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: N-acetyltransferase ESCO2-like isoform X1 [Cicer arietinum] gi|502088238|ref|XP_004488777.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11076
1 221 221 7.30E-157 –
PANTHER
PTHR11076:SF35
1 221 221 7.30E-157
IPR033257
MobiDBLite
mobidb-lite
1 62 62 – –
Pfam
PF13878
74 112 39 2.60E-15
IPR028005
Gene3D
G3DSA:3.40.630.30
173 200 28 1.10E-04
IPR016181
PANTHER
PTHR11076:SF35
249 330 82 7.30E-157
IPR033257
PANTHER
PTHR11076
249 330 82 7.30E-157 –
CDD
cd04301
253 295 43 0.00668406 –
Gene3D
G3DSA:3.40.630.30
258 299 42 1.10E-04
IPR016181
SUPERFAMILY
SSF55729
260 298 39 6.89E-05
IPR016181
Pfam
PF13880
262 329 68 9.10E-28
IPR028009

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000070
Biological process Mitotic sister chromatid segregation The cell cycle process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets.
Subterm of
Part of
GO:0007062
Biological process Sister chromatid cohesion The cell cycle process in which the sister chromatids of a replicated chromosome become tethered to each other.
Subterm of
Part of
GO:0016407
Molecular function Acetyltransferase activity Catalysis of the transfer of an acetyl group to an acceptor molecule.
Subterm of
GO:0045132
Biological process Meiotic chromosome segregation The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets during M phase of the meiotic cell cycle.
Subterm of
Part of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj1g3v4730340.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4730340.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.