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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4830330 |
| Transcript ID | Lj1g3v4830330.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable calcium-activated outward-rectifying potassium channel 5, chloroplastic-like [Glycine max] gi|356503966|ref|XP_003520770.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 93 | 93 | – | – | |
| MobiDBLite | 15 | 58 | 44 | – | – | |
| PANTHER | 72 | 372 | 301 | 3.70E-210 | – | |
| PANTHER | 72 | 372 | 301 | 3.70E-210 | – | |
| SUPERFAMILY | 87 | 176 | 90 | 1.83E-21 | – | |
| TMHMM | 90 | 112 | 23 | – | – | |
| Gene3D | 94 | 177 | 84 | 1.80E-18 | – | |
| Phobius | 94 | 112 | 19 | – | – | |
| Pfam | 97 | 176 | 80 | 7.50E-16 | ||
| Phobius | 113 | 123 | 11 | – | – | |
| Phobius | 124 | 143 | 20 | – | – | |
| TMHMM | 125 | 144 | 20 | – | – | |
| PRINTS | 133 | 161 | 29 | 3.80E-08 | ||
| Phobius | 144 | 148 | 5 | – | – | |
| Phobius | 149 | 177 | 29 | – | – | |
| TMHMM | 154 | 176 | 23 | – | – | |
| Phobius | 178 | 215 | 38 | – | – | |
| SUPERFAMILY | 206 | 314 | 109 | 1.57E-21 | – | |
| Gene3D | 214 | 301 | 88 | 8.20E-17 | – | |
| Phobius | 216 | 237 | 22 | – | – | |
| TMHMM | 216 | 238 | 23 | – | – | |
| Pfam | 223 | 291 | 69 | 1.40E-11 | ||
| Phobius | 238 | 269 | 32 | – | – | |
| PRINTS | 254 | 263 | 10 | 3.80E-08 | ||
| Phobius | 270 | 291 | 22 | – | – | |
| TMHMM | 271 | 293 | 23 | – | – | |
| Phobius | 292 | 375 | 84 | – | – | |
| ProSitePatterns | 320 | 332 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Potassium channel activity | Enables the facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Potassium ion transmembrane transport | A process in which a potassium ion is transported from one side of a membrane to the other. |
Expression pattern of Lj1g3v4830330.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4830330.1, powered by CORGI.
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