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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013099
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 24 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.558s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4830330.1
n.a. PREDICTED: probable calcium-activated outward-rectifying potassium channel 5, chloroplastic-like [Glycine max] gi|356503966|ref|XP_003520770.1| chr1 58361979 58364471 +
2 domain predictions
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Lj1g3v4830330.2
n.a. PREDICTED: probable calcium-activated outward-rectifying potassium channel 5, chloroplastic-like [Glycine max] gi|356503966|ref|XP_003520770.1| chr1 58361979 58364471 +
2 domain predictions
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Lj2g3v3088160.1
n.a. PREDICTED: probable calcium-activated outward-rectifying potassium channel 6-like [Glycine max] gi|356499358|ref|XP_003518508.1| chr2 39739616 39740582 -
2 domain predictions
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Lj2g3v3281380.1
n.a. PREDICTED: two-pore potassium channel 1-like isoform X1 [Cicer arietinum] gi|502099547|ref|XP_004491506.1| chr2 41748508 41752466 +
2 domain predictions
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Lj2g3v3281380.2
n.a. Outward rectifying potassium channel [Medicago truncatula] gi|357495031|ref|XP_003617804.1| chr2 41748777 41752466 +
2 domain predictions
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Lj4g3v0109520.1
n.a. PREDICTED: two-pore potassium channel 1-like isoform X1 [Cicer arietinum] gi|502149616|ref|XP_004507600.1| chr4 992113 993949 -
2 domain predictions
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Lj4g3v0109530.1
n.a. PREDICTED: calcium-activated outward-rectifying potassium channel 1-like [Glycine max] gi|356564456|ref|XP_003550470.1| chr4 992306 993949 -
2 domain predictions
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Lj4g3v0281190.1
n.a. PREDICTED: two-pore potassium channel 3-like isoform X1 [Cicer arietinum] gi|502141930|ref|XP_004504708.1| chr4 3364736 3370698 -
2 domain predictions
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Lj4g3v0281190.3
n.a. PREDICTED: two-pore potassium channel 3-like isoform X1 [Cicer arietinum] gi|502141930|ref|XP_004504708.1| chr4 3364736 3369847 -
2 domain predictions
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Lj6g3v0486200.1
n.a. PREDICTED: calcium-activated outward-rectifying potassium channel 1-like [Glycine max] gi|356501636|ref|XP_003519630.1| chr6 4843285 4845579 -
2 domain predictions
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Lj6g3v2274590.1
n.a. PREDICTED: LOW QUALITY PROTEIN: potassium channel AKT2/3-like [Cicer arietinum] gi|502076890|ref|XP_004485488.1| chr6 26507978 26511739 +
2 domain predictions
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LotjaGi1g1v0017000.1
n.a. Potassium channel; TAIR: AT5G55630.1 Outward rectifying potassium channel protein; Swiss-Prot: sp|Q8LBL1|KCO1_ARATH Two-pore potassium channel 1; TrEMBL-Plants: tr|I3S745|I3S745_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0017000 LjG1.1_chr1 2149812 2153914 -
2 domain predictions
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LotjaGi1g1v0017000.2
n.a. Potassium channel; TAIR: AT5G55630.1 Outward rectifying potassium channel protein; Swiss-Prot: sp|Q8LBL1|KCO1_ARATH Two-pore potassium channel 1; TrEMBL-Plants: tr|I3S745|I3S745_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0017000 LjG1.1_chr1 2149812 2153914 -
2 domain predictions
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LotjaGi1g1v0042400.1
n.a. Potassium channel; TAIR: AT4G18160.1 Ca2+ activated outward rectifying K+ channel 6; Swiss-Prot: sp|Q9SVV6|KCO6_ARATH Two-pore potassium channel 3; TrEMBL-Plants: tr|K7KBC7|K7KBC7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0042400 LjG1.1_chr1 5822117 5829363 +
2 domain predictions
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LotjaGi1g1v0042400.2
n.a. Potassium channel; TAIR: AT4G18160.1 Ca2+ activated outward rectifying K+ channel 6; Swiss-Prot: sp|Q9SVV6|KCO6_ARATH Two-pore potassium channel 3; TrEMBL-Plants: tr|K7KBC7|K7KBC7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0042400 LjG1.1_chr1 5822117 5829363 +
2 domain predictions
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LotjaGi1g1v0084300_LC.1
n.a. Potassium channel; TAIR: AT4G18160.1 Ca2+ activated outward rectifying K+ channel 6; Swiss-Prot: sp|Q9SVV6|KCO6_ARATH Two-pore potassium channel 3; TrEMBL-Plants: tr|K7KBC7|K7KBC7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0084300_LC LjG1.1_chr1 12094344 12097770 -
2 domain predictions
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LotjaGi1g1v0084300_LC.2
n.a. Potassium channel; TAIR: AT4G18160.1 Ca2+ activated outward rectifying K+ channel 6; Swiss-Prot: sp|Q9SVV6|KCO6_ARATH Two-pore potassium channel 3; TrEMBL-Plants: tr|A0A072UF90|A0A072UF90_MEDTR Outward rectifying potassium channel protein; Found in the gene: LotjaGi1g1v0084300_LC LjG1.1_chr1 12094344 12097770 -
2 domain predictions
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LotjaGi1g1v0755000.1
n.a. Potassium channel; TAIR: AT4G01840.1 Ca2+ activated outward rectifying K+ channel 5; Swiss-Prot: sp|Q9S6Z8|KCO5_ARATH Two-pore potassium channel 5; TrEMBL-Plants: tr|I1JQW7|I1JQW7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0755000 LjG1.1_chr1 132798133 132805851 +
2 domain predictions
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LotjaGi1g1v0755000.2
n.a. Potassium channel; TAIR: AT4G01840.1 Ca2+ activated outward rectifying K+ channel 5; Swiss-Prot: sp|Q9S6Z8|KCO5_ARATH Two-pore potassium channel 5; TrEMBL-Plants: tr|I1JQW7|I1JQW7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0755000 LjG1.1_chr1 132798133 132805851 +
2 domain predictions
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LotjaGi4g1v0006700.1
n.a. Potassium channel; TAIR: AT5G55630.1 Outward rectifying potassium channel protein; Swiss-Prot: sp|Q8LBL1|KCO1_ARATH Two-pore potassium channel 1; TrEMBL-Plants: tr|I1MQY9|I1MQY9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0006700 LjG1.1_chr4 991937 995639 -
2 domain predictions
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LotjaGi4g1v0025600.1
n.a. Potassium channel; TAIR: AT4G18160.1 Ca2+ activated outward rectifying K+ channel 6; Swiss-Prot: sp|Q9SVV6|KCO6_ARATH Two-pore potassium channel 3; TrEMBL-Plants: tr|I1KRD8|I1KRD8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0025600 LjG1.1_chr4 3151692 3158584 -
2 domain predictions
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LotjaGi4g1v0025600.2
n.a. Potassium channel; TAIR: AT4G18160.1 Ca2+ activated outward rectifying K+ channel 6; Swiss-Prot: sp|Q9SVV6|KCO6_ARATH Two-pore potassium channel 3; TrEMBL-Plants: tr|K7L5I6|K7L5I6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0025600 LjG1.1_chr4 3153008 3158253 -
2 domain predictions
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LotjaGi6g1v0143500.1
n.a. Potassium channel; TAIR: AT5G55630.1 Outward rectifying potassium channel protein; Swiss-Prot: sp|Q8LBL1|KCO1_ARATH Two-pore potassium channel 1; TrEMBL-Plants: tr|I1JJJ2|I1JJJ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0143500 LjG1.1_chr6 41357028 41362907 -
2 domain predictions
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LotjaGi6g1v0361300.1
n.a. Potassium channel; TAIR: AT4G22200.1 potassium transport 2/3; Swiss-Prot: sp|Q38898|AKT2_ARATH Potassium channel AKT2/3; TrEMBL-Plants: tr|G7IPF9|G7IPF9_MEDTR Potassium outward rectifying channel protein; Found in the gene: LotjaGi6g1v0361300 LjG1.1_chr6 67328654 67335839 +
2 domain predictions
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