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Lj1g3v4831730.1

Overview

Field Value
Gene ID Lj1g3v4831730
Transcript ID Lj1g3v4831730.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: glycogen synthase kinase-3 homolog MsK-3-like [Cicer arietinum] gi|502112826|ref|XP_004494455.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24057
2 277 276 5.30E-236 –
PANTHER
PTHR24057:SF10
2 277 276 5.30E-236 –
Gene3D
G3DSA:3.30.200.20
68 148 81 5.10E-24 –
CDD
cd14137
69 277 209 5.01E-159 –
SUPERFAMILY
SSF56112
73 277 205 8.36E-68
IPR011009
ProSiteProfiles
PS50011
74 277 204 39.495
IPR000719
SMART
SM00220
74 277 204 3.40E-49
IPR000719
Pfam
PF00069
74 276 203 4.10E-55
IPR000719
ProSitePatterns
PS00107
80 104 25 –
IPR017441
Gene3D
G3DSA:1.10.510.10
149 277 129 8.50E-42 –
ProSitePatterns
PS00108
195 207 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj1g3v4831730.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4831730.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.