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Lj1g3v4833900.1

Overview

Field Value
Gene ID Lj1g3v4833900
Transcript ID Lj1g3v4833900.1
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24096:SF111
1 327 327 2.30E-222 –
PANTHER
PTHR24096
1 327 327 2.30E-222 –
Gene3D
G3DSA:3.40.50.980
21 72 52 1.60E-13 –
SUPERFAMILY
SSF56801
22 169 148 2.35E-50 –
Pfam
PF00501
44 327 284 3.60E-58
IPR000873
ProSitePatterns
PS00455
66 77 12 –
IPR020845
Gene3D
G3DSA:3.40.50.980
73 169 97 7.20E-31 –
Gene3D
G3DSA:3.40.50.980
215 277 63 7.20E-31 –
SUPERFAMILY
SSF56801
215 327 113 2.35E-50 –
Gene3D
G3DSA:2.30.38.10
278 327 50 1.20E-04 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj1g3v4833900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4833900.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.