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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4919900 |
| Transcript ID | Lj1g3v4919900.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Copper chaperone (CCH)-related protein-like protein [Medicago truncatula] gi|357511925|ref|XP_003626251.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 156 | 142 | 3.60E-77 | – | |
| PANTHER | 15 | 156 | 142 | 3.60E-77 | – | |
| SUPERFAMILY | 25 | 93 | 69 | 2.11E-15 | ||
| Gene3D | 30 | 93 | 64 | 1.30E-19 | – | |
| CDD | 31 | 90 | 60 | 1.60E-12 | ||
| Pfam | 33 | 85 | 53 | 1.00E-13 | ||
| ProSiteProfiles | 35 | 91 | 57 | 11.687 | ||
| Coils | 95 | 125 | 31 | – | – | |
| MobiDBLite | 100 | 140 | 41 | – | – | |
| PANTHER | 214 | 290 | 77 | 3.60E-77 | – | |
| PANTHER | 214 | 290 | 77 | 3.60E-77 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of Lj1g3v4919900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4919900.3, powered by CORGI.
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