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Lj1g3v4931580.1

Overview

Field Value
Gene ID Lj1g3v4931580
Transcript ID Lj1g3v4931580.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: kinesin-like protein KIFC3-like [Cicer arietinum] gi|502113341|ref|XP_004494619.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24115
25 37 13 1.10E-228
IPR027640
PANTHER
PTHR24115:SF449
25 37 13 1.10E-228 –
Coils
Coil
80 107 28 – –
PANTHER
PTHR24115
131 546 416 1.10E-228
IPR027640
PANTHER
PTHR24115:SF449
131 546 416 1.10E-228 –
SMART
SM00129
149 482 334 3.50E-157
IPR001752
Gene3D
G3DSA:3.40.850.10
149 482 334 1.50E-119
IPR001752
SUPERFAMILY
SSF52540
151 511 361 1.11E-115
IPR027417
ProSiteProfiles
PS50067
151 474 324 112.57
IPR001752
Pfam
PF00225
157 474 318 3.60E-108
IPR001752
PRINTS
PR00380
225 246 22 7.40E-37
IPR001752
PRINTS
PR00380
344 361 18 7.40E-37
IPR001752
ProSitePatterns
PS00411
374 385 12 –
IPR019821
PRINTS
PR00380
375 393 19 7.40E-37
IPR001752
PRINTS
PR00380
424 445 22 7.40E-37
IPR001752
Coils
Coil
488 546 59 – –
MobiDBLite
mobidb-lite
539 651 113 – –
MobiDBLite
mobidb-lite
664 732 69 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003777
Molecular function Microtubule motor activity Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0007018
Biological process Microtubule-based movement A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.
Subterm of
GO:0008017
Molecular function Microtubule binding Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj1g3v4931580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4931580.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.