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Lj1g3v4955420.1

Overview

Field Value
Gene ID Lj1g3v4955420
Transcript ID Lj1g3v4955420.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable serine/threonine-protein kinase At1g54610-like [Glycine max] gi|356505916|ref|XP_003521735.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 93 93 – –
PANTHER
PTHR24056:SF226
56 442 387 0 –
PANTHER
PTHR24056
56 442 387 0 –
Gene3D
G3DSA:3.30.200.20
114 220 107 1.90E-32 –
SUPERFAMILY
SSF56112
114 410 297 2.97E-90
IPR011009
CDD
cd07840
120 404 285 1.74E-157 –
SMART
SM00220
120 404 285 3.60E-88
IPR000719
ProSiteProfiles
PS50011
120 404 285 43.834
IPR000719
Pfam
PF00069
120 404 285 2.70E-66
IPR000719
ProSitePatterns
PS00107
126 149 24 –
IPR017441
Gene3D
G3DSA:1.10.510.10
221 454 234 2.10E-54 –
ProSitePatterns
PS00108
240 252 13 –
IPR008271
MobiDBLite
mobidb-lite
410 456 47 – –
PANTHER
PTHR24056
476 542 67 0 –
PANTHER
PTHR24056:SF226
476 542 67 0 –
MobiDBLite
mobidb-lite
539 584 46 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj1g3v4955420.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4955420.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.