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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4955470 |
| Transcript ID | Lj1g3v4955470.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: WD repeat-containing protein 48-like isoform X1 [Cicer arietinum] gi|502113479|ref|XP_004494664.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 760 | 760 | 0 | – | |
| PANTHER | 1 | 760 | 760 | 0 | – | |
| SMART | 19 | 68 | 50 | 6.2 | ||
| CDD | 36 | 368 | 333 | 3.36E-48 | – | |
| Gene3D | 37 | 375 | 339 | 1.40E-59 | ||
| SUPERFAMILY | 48 | 155 | 108 | 1.95E-62 | ||
| ProSiteProfiles | 52 | 339 | 288 | 35.857 | ||
| SMART | 73 | 111 | 39 | 6.40E-04 | ||
| PRINTS | 98 | 112 | 15 | 1.70E-05 | ||
| ProSitePatterns | 98 | 112 | 15 | – | ||
| SMART | 115 | 155 | 41 | 7.00E-06 | ||
| Pfam | 116 | 155 | 40 | 5.20E-04 | ||
| ProSiteProfiles | 122 | 157 | 36 | 9.606 | ||
| SUPERFAMILY | 205 | 384 | 180 | 1.95E-62 | ||
| SMART | 207 | 246 | 40 | 9.40E-04 | ||
| ProSiteProfiles | 214 | 255 | 42 | 14.418 | ||
| Pfam | 215 | 246 | 32 | 0.011 | ||
| PRINTS | 233 | 247 | 15 | 1.70E-05 | ||
| SMART | 249 | 288 | 40 | 2.30E-06 | ||
| Pfam | 252 | 288 | 37 | 2.10E-04 | ||
| ProSiteProfiles | 256 | 297 | 42 | 14.585 | ||
| PRINTS | 275 | 289 | 15 | 1.70E-05 | ||
| ProSitePatterns | 275 | 289 | 15 | – | ||
| SMART | 291 | 330 | 40 | 1.20E-04 | ||
| Pfam | 293 | 328 | 36 | 0.045 | ||
| SMART | 333 | 369 | 37 | 120 | ||
| SUPERFAMILY | 415 | 452 | 38 | 1.95E-62 | ||
| Gene3D | 426 | 449 | 24 | 1.40E-59 | ||
| Pfam | 613 | 759 | 147 | 1.20E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v4955470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4955470.1, powered by CORGI.
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