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Lj1g3v4957780.1

Overview

Field Value
Gene ID Lj1g3v4957780
Transcript ID Lj1g3v4957780.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase WNK1-like [Glycine max] gi|356535149|ref|XP_003536111.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13902
30 315 286 0 –
PANTHER
PTHR13902:SF21
30 315 286 0 –
Gene3D
G3DSA:3.30.200.20
45 153 109 9.00E-21 –
CDD
cd13983
51 310 260 1.88E-173 –
ProSiteProfiles
PS50011
53 310 258 39.255
IPR000719
SMART
SM00220
53 310 258 2.70E-59
IPR000719
Pfam
PF00069
56 310 255 2.00E-50
IPR000719
SUPERFAMILY
SSF56112
57 311 255 4.18E-66
IPR011009
Gene3D
G3DSA:1.10.510.10
154 311 158 4.10E-46 –
ProSitePatterns
PS00108
177 189 13 –
IPR008271
PANTHER
PTHR13902
372 466 95 0 –
PANTHER
PTHR13902:SF21
372 466 95 0 –
Gene3D
G3DSA:3.10.20.90
400 458 59 3.00E-14 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj1g3v4957780.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4957780.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.