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Lj2g3v0608560.1

Overview

Field Value
Gene ID Lj2g3v0608560
Transcript ID Lj2g3v0608560.1
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP 1 26 26
PANTHER 1 208 208 8.70E-75
SignalP 1 26 26
Phobius 1 26 26
Phobius 1 5 5
Phobius 6 17 12
TMHMM 7 29 23
Phobius 18 26 9
Phobius 27 208 182
SUPERFAMILY 28 207 180 5.79E-45
Gene3D 28 208 181 6.20E-56
SMART 31 208 178 2.10E-51
PRINTS 31 60 30 1.20E-16
CDD 31 206 176 1.76E-54
Pfam 32 206 175 2.40E-46
PRINTS 72 92 21 1.20E-16
PRINTS 153 172 20 1.20E-16

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Endopeptidase inhibitor activity Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides.

Expression data

Expression pattern

Expression pattern of Lj2g3v0608560.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0608560.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.