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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0636870 |
| Transcript ID | Lj2g3v0636870.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | NADH-quinone oxidoreductase subunit I [Medicago truncatula] gi|358344240|ref|XP_003636199.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 48 | 228 | 181 | 2.90E-152 | – | |
| PANTHER | 48 | 228 | 181 | 2.90E-152 | – | |
| Hamap | 76 | 212 | 137 | 29.155 | ||
| Gene3D | 80 | 205 | 126 | 2.30E-24 | – | |
| TIGRFAM | 85 | 206 | 122 | 9.20E-52 | ||
| SUPERFAMILY | 102 | 212 | 111 | 1.30E-28 | – | |
| ProSiteProfiles | 120 | 149 | 30 | 10.146 | ||
| Pfam | 128 | 182 | 55 | 2.70E-13 | ||
| ProSitePatterns | 129 | 140 | 12 | – | ||
| ProSiteProfiles | 159 | 188 | 30 | 10.743 | ||
| ProSitePatterns | 168 | 179 | 12 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity, acting on NAD(P)H | Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Molecular function | 4 iron, 4 sulfur cluster binding | Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj2g3v0636870.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0636870.2, powered by CORGI.
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