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IPR017900

Source: InterPro

Description

IPR017900 is a 4Fe-4S ferredoxin, iron-sulphur binding, conserved site.

<p>This entry represents a conserved site of Fe-4S ferredoxin, iron-sulphur binding domain</p> <p>Ferredoxins are iron-sulphur proteins that mediate electron transfer in a range of metabolic reactions; they fall into several subgroups according to the nature of their iron-sulphur cluster(s) [[cite:PUB00003397], [cite:PUB00003406]]. One group, originally found in bacteria, has been termed "bacterial-type", in which the active centre is a 4Fe-4S cluster. 4Fe-4S ferredoxins may in turn be subdivided into further groups, based on their sequence properties. Most contain at least one conserved domain, including four Cys residues that bind to a 4Fe-4S centre.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 35

Transcript Name Description Predicted domains Domain count
Lj0g3v0050859.1
– NADH dehydrogenase subunit I [Lotus japonicus] gi|13518491|ref|NP_084849.1|
Domains
18
Lj0g3v0259339.1
– NADH dehydrogenase subunit I [Lotus japonicus] gi|13518491|ref|NP_084849.1|
Domains
13
Lj0g3v0336519.1
– PREDICTED: succinate dehydrogenase [ubiquinone] gi|502089528|ref|XP_004488937.1|
Domains
17
Lj1g3v3740570.1
– PREDICTED: succinate dehydrogenase [ubiquinone] gi|502089528|ref|XP_004488937.1|
Domains
24
Lj1g3v3751710.1
– PREDICTED: succinate dehydrogenase [ubiquinone] gi|502089528|ref|XP_004488937.1|
Domains
23
Lj1g3v3751710.2
– PREDICTED: succinate dehydrogenase [ubiquinone] gi|502089528|ref|XP_004488937.1|
Domains
23
Lj2g3v0636870.1
– NADH-quinone oxidoreductase subunit I [Medicago truncatula] gi|358344860|ref|XP_003636504.1|
Domains
12
Lj2g3v0636870.2
– NADH-quinone oxidoreductase subunit I [Medicago truncatula] gi|358344240|ref|XP_003636199.1|
Domains
12
Lj2g3v1560740.1
– PREDICTED: ABC transporter E family member 2-like [Cicer arietinum] gi|502161914|ref|XP_004512327.1|
Domains
25
Lj2g3v3034040.1
– F-box protein SKIP28 [Medicago truncatula] gi|357521249|ref|XP_003630913.1|
Domains
5
Lj4g3v0485140.1
– PREDICTED: succinate dehydrogenase [ubiquinone] gi|502089528|ref|XP_004488937.1|
Domains
18
Lj4g3v3112880.1
– F-box protein SKIP28 [Medicago truncatula] gi|357521249|ref|XP_003630913.1|
Domains
11
Lj6g3v1915840.1
– 4Fe-4S ferredoxin, iron-sulfur binding [Medicago truncatula] gi|124359951|gb|ABN07967.1|
Domains
11
Lj6g3v1915840.2
– 4Fe-4S ferredoxin, iron-sulfur binding [Medicago truncatula] gi|124359951|gb|ABN07967.1|
Domains
11
Lj6g3v1915840.3
– 4Fe-4S ferredoxin, iron-sulfur binding [Medicago truncatula] gi|124359951|gb|ABN07967.1|
Domains
11
Ljchlorog3v0013320.1
– PREDICTED: NAD(P)H-quinone oxidoreductase chain 4, chloroplastic-like [Cicer arietinum] gi|502182490|ref|XP_004516946.1|
Domains
12
Ljchlorog3v0013340.1
– NADH dehydrogenase subunit I [Lotus japonicus] gi|13518491|ref|NP_084849.1|
Domains
18
LotjaGi1g1v0218600_LC.1
– Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; TAIR: AT5G40650.1 succinate dehydrogenase 2-2; Swiss-Prot: sp|Q8LB02|SDHB2_ARATH Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial; TrEMBL-Plants: tr|A0A0L9UIZ5|A0A0L9UIZ5_PHAAN Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Found in the gene: LotjaGi1g1v0218600_LC
Domains
19
LotjaGi1g1v0616900.1
– Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; TAIR: AT5G40650.1 succinate dehydrogenase 2-2; Swiss-Prot: sp|Q8LB02|SDHB2_ARATH Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial; TrEMBL-Plants: tr|A0A0S3SJV1|A0A0S3SJV1_PHAAN Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Found in the gene: LotjaGi1g1v0616900
Domains
25
LotjaGi1g1v0616900.2
– Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; TAIR: AT5G40650.1 succinate dehydrogenase 2-2; Swiss-Prot: sp|Q8LB02|SDHB2_ARATH Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial; TrEMBL-Plants: tr|A0A0S3SJV1|A0A0S3SJV1_PHAAN Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Found in the gene: LotjaGi1g1v0616900
Domains
25
LotjaGi1g1v0617600.1
– Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; TAIR: AT5G40650.1 succinate dehydrogenase 2-2; Swiss-Prot: sp|Q8LB02|SDHB2_ARATH Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial; TrEMBL-Plants: tr|A0A0S3SJV1|A0A0S3SJV1_PHAAN Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Found in the gene: LotjaGi1g1v0617600
Domains
24
LotjaGi1g1v0617600.2
– Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; TAIR: AT5G40650.1 succinate dehydrogenase 2-2; Swiss-Prot: sp|Q8LB02|SDHB2_ARATH Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial; TrEMBL-Plants: tr|A0A0S3SJV1|A0A0S3SJV1_PHAAN Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Found in the gene: LotjaGi1g1v0617600
Domains
24
LotjaGi1g1v0617600.3
– Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; TAIR: AT5G40650.1 succinate dehydrogenase 2-2; Swiss-Prot: sp|Q8LB02|SDHB2_ARATH Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial; TrEMBL-Plants: tr|A0A0S3SJV1|A0A0S3SJV1_PHAAN Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Found in the gene: LotjaGi1g1v0617600
Domains
24
LotjaGi2g1v0191800.1
– NADH-quinone oxidoreductase subunit I; TAIR: AT1G16700.1 Alpha-helical ferredoxin; Swiss-Prot: sp|P80269|NDUS8_SOLTU NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial; TrEMBL-Plants: tr|I1MEF5|I1MEF5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0191800
Domains
12
LotjaGi2g1v0191800.2
– NADH-quinone oxidoreductase subunit I; TAIR: AT1G16700.1 Alpha-helical ferredoxin; Swiss-Prot: sp|P80269|NDUS8_SOLTU NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial; TrEMBL-Plants: tr|I1MEF5|I1MEF5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0191800
Domains
12
LotjaGi2g1v0349000.1
– ABC(ATP-binding) family transporter; TAIR: AT4G19210.1 RNAse l inhibitor protein 2; Swiss-Prot: sp|Q8LPJ4|AB2E_ARATH ABC transporter E family member 2; TrEMBL-Plants: tr|A0A0L9URH1|A0A0L9URH1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349000
Domains
25
LotjaGi2g1v0349000.3
– ABC(ATP-binding) family transporter; TAIR: AT4G19210.1 RNAse l inhibitor protein 2; Swiss-Prot: sp|Q8LPJ4|AB2E_ARATH ABC transporter E family member 2; TrEMBL-Plants: tr|A0A0L9URH1|A0A0L9URH1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349000
Domains
25
LotjaGi2g1v0349000.4
– ABC(ATP-binding) family transporter; TAIR: AT4G19210.1 RNAse l inhibitor protein 2; Swiss-Prot: sp|Q8LPJ4|AB2E_ARATH ABC transporter E family member 2; TrEMBL-Plants: tr|A0A0L9URH1|A0A0L9URH1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349000
Domains
25
LotjaGi6g1v0258700.1
– NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700
Domains
11
LotjaGi6g1v0258700.2
– NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700
Domains
11
LotjaGi6g1v0258700.3
– NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700
Domains
11
LotjaGi6g1v0258700.4
– NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700
Domains
11
LotjaGi6g1v0258700.5
– NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700
Domains
11
LotjaGi6g1v0258700.6
– NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700
Domains
11
LotjaGi6g1v0258700.7
– NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF54862 SUPERFAMILY 1 2.86