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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0744270 |
| Transcript ID | Lj2g3v0744270.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein CASP-like [Glycine max] gi|356520513|ref|XP_003528906.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | – | – | |
| Phobius | 1 | 638 | 638 | – | – | |
| PANTHER | 14 | 680 | 667 | 0 | – | |
| Coils | 45 | 65 | 21 | – | – | |
| MobiDBLite | 48 | 68 | 21 | – | – | |
| Coils | 84 | 104 | 21 | – | – | |
| Coils | 125 | 190 | 66 | – | – | |
| Coils | 193 | 241 | 49 | – | – | |
| Coils | 253 | 287 | 35 | – | – | |
| Coils | 299 | 358 | 60 | – | – | |
| Coils | 418 | 459 | 42 | – | – | |
| Pfam | 434 | 664 | 231 | 2.10E-64 | ||
| Coils | 510 | 551 | 42 | – | – | |
| Phobius | 639 | 660 | 22 | – | – | |
| TMHMM | 643 | 660 | 18 | – | – | |
| Phobius | 661 | 688 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intra-Golgi vesicle-mediated transport | The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network). | ||
| Cellular component | Integral component of Golgi membrane | The component of the Golgi membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj2g3v0744270.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0744270.1, powered by CORGI.
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